Gene detail

Detailed information of FUN_033019-T1 in Colpophyllia natans

Genomic Location: contig_119:178109...181115
NR annotation: XP_020618243.1, putative ATP-dependent RNA helicase DHX57 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6P158	Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens OX=9606 GN=DHX57 PE=1 SV=2
Q6P5D3	Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus OX=10090 GN=Dhx57 PE=1 SV=2
F4ILR7	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana OX=3702 GN=At2g35920 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18044	zf-CCCH_4	CCCH-type zinc finger	Domain	Interproscan
PF05773	RWD	RWD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041367	Domain	E3 ligase, CCCH-type zinc finger	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR042615	Domain	DHX57, UBA domain	Interproscan
IPR015940	Domain	Ubiquitin-associated domain	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR006575	Domain	RWD domain	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18934	ATP-DEPENDENT RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan