Detailed information of FUN_033204-T2 in Colpophyllia natans

Genomic Location: contig_124:43107...55280
NR annotation: XP_020605684.1, eukaryotic translation initiation factor 2D-like [Orbicella faveolata]
Species Colpophyllia natans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P41214Eukaryotic translation initiation factor 2D OS=Homo sapiens OX=9606 GN=EIF2D PE=1 SV=3
Q5RA63Eukaryotic translation initiation factor 2D OS=Pongo abelii OX=9601 GN=EIF2D PE=2 SV=1
P0CL18Eukaryotic translation initiation factor 2D OS=Oryctolagus cuniculus OX=9986 GN=EIF2D PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003842 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17832
all species →		Pre-PUAPre-PUA-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004521
all species →		DomainUncharacterised domain CHP00451Interproscan
IPR003121
all species →		DomainSWIB/MDM2 domainInterproscan
IPR048247
all species →		DomainEukaryotic translation initiation factor 2D, N-terminal domainInterproscan
IPR002478
all species →		DomainPUA domainInterproscan
IPR048248
all species →		DomainEukaryotic translation initiation factor 2D-like, PUA RNA-binding domainInterproscan
IPR036885
all species →		Homologous_superfamilySWIB/MDM2 domain superfamilyInterproscan
IPR039757
all species →		FamilyEukaryotic translation initiation factor 2DInterproscan
IPR015947
all species →		Homologous_superfamilyPUA-like superfamilyInterproscan
IPR041366
all species →		DomainPre-PUA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12217
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 2DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0001731
all species →		Biological Processformation of translation preinitiation complexInterproscan
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_033204-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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