Gene detail

Detailed information of FUN_033218-T1 in Siderastrea siderea

Genomic Location: contig_35:6943842...6948288
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_033218-T1

ATGGATTCTTTTCTTCAAAAAGCTGCGGAAATTAGTCAGCAACATCCAAAACCTGATGTAAAGTTCTCTTACGGAACGGCTGGATTTCGCATGCGGGCGGACCACCTAGACTCTGTTATGTATCGCATGGGTCTTCTTGCAGTTCTACGCTCCAAGGCCAAGGACGGAAAAGTTATTGGTGCCGTCGTCACTGCTTCGCATAACCCTGTTCATGATAATGGCGTCAAGCTAGTCGATCCTCTTGGCGAAATGCTGCAGTTCTCGTGGGAGAAACATGCGTCGGATCTGGCAAATGCCGAAGACATCGTCGAGGTCCTGAAAGGGGTGGCGATGGAACACGATATCGACTGGAGTGTTCCTGCTAAGGTGTTTATTGCACGAGACACACGCCCCAGTGGCGTGCAGTTTGTGAAGGCCTTGATGGATGGAGTGCAAGCCTTGGGTGGATCATGCCATGACTATGGTGTTCTGGCCACTCCTCAGTTGCATTACATGGTGAGATGCCACAACACAGCTGGTGAATATGGTGAAGCAACAGAGGAGGGCTACTACAAGAAACTCTCTAATACCTTCCTGGATCTGAGGTCACTGTCTGGGAAAACTGGTGTCCCTGTGGTCAAGCTGGATGGTGCTAATGGGGTGGGAGCTCTTAAATTGAGGAAGCTTGCCAAGCATCTGCAGGGAACTTTGTCATTTGAAGTTTCTAATGATGGTTCAAATGGAAAGCTTAATGAGAAGTGCGGCGCTGATTATGTCAAGCTTTACCAATGTGCCCCTGATGGGATGGATATCAGCCCAGGTGACAGATGTGTGACATTTGATGGTGACGCTGACAGGGTGTTGTATTTTTACGTTGATAAAGATCACAAGTTCCGTTTGCTTGATGGCGATAGAATTGCTACCCTGATAGTAGGCTACCTGAAGGAAAAACTTGATAAAACAGGAGTCACACTTGACAGAGGCTTAGGAATAGTCCAGACTGCATATGCCAATGGCAGTTCTACGTCATATGCTGAAAATACCCTTGGTGTACCTGTGGCATGTACAAAAACAGGGGTGAAACATGTTCATCACAAAGCTGGGGAATTTGACATTGGAGTCTACTTTGAAGCAAATGGCCATGGAACAGCATTGTttaagaacattgttgtaaATAAGATGAATGCTGTTGTTGAAGAAGCCGGTGACAGCTCTGAGAGGTGTAAAGCTGCAAAACAGGTCTTAAGCATGATAGATTTAGTCAACCAAACTGTGGGTGATGCAATGAGTGATATGCTGGTGGTTGAGAGCATCCTTCATGAGAAAGGATGGAGTCTGGAAGACTGGAGTGCCACCTACAGCGACCTCCCCAACAGGCAACGAAAAGTCACAATCAAGGATCGCACTATCATTAAAACAACAGATGCTGAGAGGAAGGTCACAGCTCCTGAAGGACTTCAAGGAGAAATTGACAGGCTTGTGTCTGCGTTCACAAGTGCGAGATCCTTTGTGCGACCATCTGGTACTGAGGATATTGTGCGTGTTTATGCTGAGGCTGACACTCAAGAAGCTGCAGATTCTCTAGCACTGGCCGTTTCCCAAAAGGTGTACGATTTGGCTGGAGGTGTTGGGGATAGGCCATAATTTGACTTGCATTATCCTTGTAAATCTATCCTCATGTAAGTACATTGCAAGTTCGACCTTCCTGATAAACGTATTTCTCTGTCTACCTAGTTTGAGGAAACATTACTTGTGAACAATCGATATTTAGTAGTACACAATACTGTCTCTTCGCTTGATACTGTCTCTTAGATCATTTTCATTGTATGGCTGTGTACTGTACATGAAGTTGTAAGTACTGTAGTTTATTGCTTCTTCAAGAGGGCTAATCTGTACTGATGTTAAAACAAAGTACCTTTTTGTCACACACGAAAACACGGTAGTTAAAAACATCAAGATTCAAGTCATTCTGTCTTAAGTAGAACAAACTATTATCagttttcagcaatttttccgGGACACTTGACAGTAAAGAACTTGAAACAACTGGCCCAATATTTTCAAGTTGCAGTTCTTTTCCATCATATCCTAGCCACCTCCAGCCAAAGACCTTTAGTTTCAGAGAGCTAGTCAAATAAAATTAATCCAGTTTTTTGGCATTTCACTCAATTTGTCTTTAAGCATTTTAAAGTAAATAATTATACTCAAAATAGATGATAGAAGCCCATTTAAAGAAGTATCACAAggatataaaataaaattattattaaataacaaGTAGAAAAGGTTGGACTACTACAATTTGAAACAAGTTTGAAGATATTTTATTGTTGGAGAATTCATGCACTGTTATTTTTGGTGTGTGGAGAATTATTATATGTAAATGGTTTCTTGACAAAATTTATGACAGTTACCTATAGGCCTTTTACCAAGCCTGAATGTGTACCCAGCTAAACCTCTTGAAAGCTGAACTTTGGAGGCTCGTAAAATATCGAGAATTCAGGCAAACACAACAGTTCTTTCGACATTTTACTCAGAAAATTATGGAGAATTTTTTAATCCAAAAAATGTTTGGAGGGTTGTAGGCActttaaatatttccttaatAATCCATCTTCTGGTgtattatttttagaaaaaccAGAAAGACATGAATGCTCAAGGGGACAGTCGTATTATCTGAAAGGGGTATTTGACATTGATGACAGATAAAAGGgtctacactcttttttttttataagaatgtgtacaatttggctgagcctgaggattttcttattttagcccatacaattcttaaattttggggcaaatctcaccctcaacgttcttataaaaatgtttCTTACTAAAAAAAAGTGTATTGGTTGACTTACAGTAGAAGAGATGTTATTACAAGCCTATTgaatagcaaaaaaaaaatgttgaataTTTTTATAGTTCGTGGTCACTAAACGTGGTCTTCTTATCTTTTGTCTTTCTTCTCAAATGAAGAGTAATTACTCCCCACGTTTTGACCAAGGTATTGATCAATTTTCATGATTGCTAATTTTGCCTTCAGTCTCCTCTGGCTTTTCAGGAGGCCTGACAATTTGAGTGATGTGGTTGGGGTTTTAACTTTAAGGGATGAAAAGTTTGCTGTTATTATGCCGACTGTTGGTACATAATTTTGTATATATGGCATTAAAAAGATAGTAAAATGAACATTCAATTAAAAGTGAAGAAATATTCTTTTCTCAGTTTCATTTTGTGGATAAATTATGGTTCTTTGGAAGTGTCTCTCCCCCGTCTCCACCAACGTATTCTTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02878 all species →	PGM_PMM_I	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I	Domain	Interproscan
PF00408 all species →	PGM_PMM_IV	Phosphoglucomutase/phosphomannomutase, C-terminal domain	Repeat	Interproscan
PF21404 all species →	AMG1_III	Phosphoacetylglucosamine mutase AMG1, domain III	Domain	Interproscan
PF21405 all species →	AMG1_II	Phosphoacetylglucosamine mutase AMG1, domain II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005844 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I	Interproscan
IPR036900 all species →	Homologous_superfamily	Alpha-D-phosphohexomutase, C-terminal domain superfamily	Interproscan
IPR005843 all species →	Domain	Alpha-D-phosphohexomutase, C-terminal	Interproscan
IPR049022 all species →	Domain	Phosphoacetylglucosamine mutase AMG1, domain III	Interproscan
IPR016055 all species →	Homologous_superfamily	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III	Interproscan
IPR016657 all species →	Family	Phosphoacetylglucosamine mutase	Interproscan
IPR049023 all species →	Domain	Phosphoacetylglucosamine mutase AMG1, domain II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45955 all species →	PHOSPHOACETYLGLUCOSAMINE MUTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016868 all species →	Molecular Function	intramolecular phosphotransferase activity	Interproscan
GO:0004610 all species →	Molecular Function	phosphoacetylglucosamine mutase activity	Interproscan
GO:0006048 all species →	Biological Process	UDP-N-acetylglucosamine biosynthetic process	Interproscan
GO:0071704 all species →	Biological Process	obsolete organic substance metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01836	PGM3; phosphoacetylglucosamine mutase	EC:5.4.2.3	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.