Genomic Location: contig_101:1295907...1326592
NR annotation: XP_022803918.1, CCR4-NOT transcription complex subunit 1-like [Stylophora pistillata]
| CDS | ||||
| FUN_033229-T1 | ||||
| Transcript |
| FUN_033229-T1 |
| Protein |
| FUN_033229-T1 |
| Uniprot term | Description |
|---|---|
| A5YKK6 | CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2 |
| Q6ZQ08 | CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2 |
| A1A5H6 | CCR4-NOT transcription complex subunit 1 OS=Danio rerio OX=7955 GN=cnot1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12842 | DUF3819 | CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 | Domain | Interproscan |
| PF16417 | CNOT1_TTP_bind | CCR4-NOT transcription complex subunit 1 TTP binding domain | Repeat | Interproscan |
| PF16415 | CNOT1_CAF1_bind | CCR4-NOT transcription complex subunit 1 CAF1-binding domain | Repeat | Interproscan |
| PF16418 | CNOT1_HEAT | CCR4-NOT transcription complex subunit 1 HEAT repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024557 | Domain | CCR4-NOT transcription complex subunit 1, domain 4 | Interproscan |
| IPR032193 | Domain | CCR4-NOT transcription complex subunit 1, TTP binding domain | Interproscan |
| IPR032191 | Domain | CCR4-NOT transcription complex subunit 1, CAF1-binding domain | Interproscan |
| IPR032194 | Domain | CCR4-NOT transcription complex subunit 1, HEAT repeat | Interproscan |
| IPR038535 | Homologous_superfamily | CCR4-NOT subunit 1, TTP binding domain superfamily | Interproscan |
| IPR040398 | Family | CCR4-NOT transcription complex subunit 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13162 | CCR4-NOT TRANSCRIPTION COMPLEX | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000288 | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0017148 | Biological Process | negative regulation of translation | Interproscan |
| GO:0030015 | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:0060090 | Molecular Function | molecular adaptor activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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