Detailed information of FUN_033253-T1 in Dendrogyra cylindrus

Genomic Location: contig_102:308175...314228
NR annotation: XP_020609195.1, probable indole-3-acetic acid-amido synthetase GH3.1 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9LQ68Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana OX=3702 GN=GH3.4 PE=1 SV=1
O82333Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana OX=3702 GN=GH3.1 PE=2 SV=1
A3BLS0Indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica OX=39946 GN=GH3.8 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004957 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03321
all species →		GH3GH3 auxin-responsive promoterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004993
all species →		FamilyGH3 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31901
all species →		GH3 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016881
all species →		Molecular Functionacid-amino acid ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_033253-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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