Gene detail

Detailed information of FUN_033512-T1 in Acropora pulchra

Genomic Location: ptg000023l:42838892...42847436
NR annotation: XP_029179659.2, cytochrome P450 27C1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_033512-T1

GTCGTGCGATCTCCTATACTAATTCTTGTAATTATGAGCCTTACTACGGAACCCCTCTAGAGAGGGGGCAGTGGATCGATTGCCTGATAGCCCTTCAGTCAACGCCGCTTTCTTCATTTAGAGGATGCCTTCTGCGAAAGTAAGCTGGGTCGGTGTTGGAAGAAATCCTTTTAGAATAACTCAGAATTTCAAAAGTCTAGGTTCTTTATGTCTATGGCGCTCAAAATCAACACAAGCAGCTTCCCAAGAGGCGAACTTTGATTTGGGTGATTCCACAGAGATCGAGGATTATGGCGAAGTTCGACCTTTCGACGACATTCCGGGACCGAAGCGTAGCCTGCAAAACCTGATCGCCTTTTATCGCCGAAGCGAAGGCCTTACCAAAAGTTACAAGAATTCGGAAGCTCTTTTCAAGGAATACGGTCCGATTTTCAAAAGCAATCTTACGGAAGATATGGTAATGGTCCATATTCTCGACCCAGATGATTACAAGAGAGTATTTCGAGCTGAAGGGAAGTATCCTCGAAGACCTCTCCTGGATTTCTGGGTTGAGCATCGGAAAAGGAGGAATTATTTTCCTGGATTAGTGCTTTTACAGGGAGAAGAGTGGCAGAGGGTCAGAAAGAGCATTGCTCCTAAGATGATGCGCTTGAAAACAGTGCAAGAAAACATTGATAATTTCCATGCTGTTACTGAAGATGCTATTATGAGATTTACAAAACTTAAAGAAGCTGGTAGGGGAAATGGTCACATTCCAGACTTGGAAGAGGAATTGAAGAAATTTTCAATGGAAAGTATAGGGACAGTTGCCTTCAATACACGACTGGGACTATACCAAGACCCACCTCCAGAGAAGGCACTGAAATTCATCGAAGCAGTTGATATGTTCTTCGTTCAAACTCAGAAAATGATGACAAGTCTGCCAAGTGCAATGATGCGACGGTACATTGAGACGCCAGCTCTGAAGAAATTCTTCAAAGCTGCAGACGATATTGTGGACATTGGCGAATATTTTGTCAGCAATAAAATGAAGGAGCTTAAAGAAATGTCAGAGAAAGGTATCGAGCTCTCAGATGAAGTGGTTCCCGTGTTGACATATTTACTCACCACACAAAACCTGAGTCTGGAGGAAATCAATGGTTTGGCTATTGATGTTATTGGTGGTGGTGTTGATACAACAGCAACCACATTGTTATGGATGATGTATCATCTCGGTAGTTATCCGGATGTACAAGACCAGCTTTACCAGGAGTTTGAGAGAGTTGTTGGGAAAGATGGAAGTATCACATCAAATAATATTGGCAAGTTATCCTTCCTCAAGGCTTGTCTAAAAGAATCGATGAGGTATTGTGTCTTATTCTTATTAGTATCACCCAACCAGTGGACTAATGCAAATCATGCATTTTGATTGGCTACGCTACTGTAGCTCTATCAGTAATAGTCATCGAGCGAAGTTCGCCGGTTTTGTAAACCTATTTATTTCGTTTTATTCCCAAATAAATATATTTTTTTTGCTGAATTTATTATTGCTTTTTTCTCTCCGACTAGTTGGGTGATACTAAAACAATTAGACCCTTCGCCACGGATCAATAGCCCATTCAGCTTCGCCTCATGAGCTATTGACCTGTAGCCCTTTCGGGCTACGGGTCTAATTGTTAAATAATTACAGAATTCAGCAATCCAAAATGTACATTCATATTGGTAGTATCAAGAAGCAATTTTTCGAATTTTGCCCATCCAAACTGACCGTTCGCTGTGTTCTCATTAAACCGCTTTAAACGAAAATAGAAATGTACGAAACGAATTGAAATTAATGACTTCGAATTTGATCTTTTCACGTTGGTATTTTAACGGCGTCGATCTAAGGAATACGCGACGGACGTTCTAAACTCCAGTTTATTCGTGGAATGCACCTAGGATACAACTAGGTAAAACGTTGGTGCTCGCTTTTTCCGTTCTGAGCATCGACACCGTGATTAACTTTAACAAAAATATAAGTCTTGAAAACAATGGCACCAATTTTTTGAAAGCATTTGCTTCCCCAGTACGCGAGGGACGATAAGTGGAAAAGGCGAAAACCGCTGACTGAAAACAAAATTAAACGTTCTGAAACGGTTATTGCTTGAATGGATACTCCAAAATATGGTGAGACACTTCGTGACACATAAACAGGTTCAAGCAGATAAACGACACCCTATTTACGCAGAGAATAACTGCTGGGTCAGCCACTGATCTCTAGTGATTAGGTCTAAGCGCCGGCTCGAAA

Protein

Uniprot

Uniprot term	Description
P0DOX0	Cytochrome P450 27C1 OS=Aquarana catesbeiana OX=8400 GN=cyp27c1 PE=1 SV=1
A8WGA0	Cytochrome P450 27C1 OS=Danio rerio OX=7955 GN=cyp27c1 PE=1 SV=2
Q09128	1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cyp24a1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128	Family	Cytochrome P450	Interproscan
IPR050479	Family	Cytochrome P450, families 11 and 27	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24279	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16646	ANXA5; annexin A5	-	Glycosaminoglycan binding proteins	ko00536	deepkoala