Gene detail

Detailed information of FUN_033792-T1 in Siderastrea siderea

Genomic Location: contig_36:5557624...5563910
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01997 all species →	Translin	Translin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016069 all species →	Homologous_superfamily	Translin, C-terminal	Interproscan
IPR002848 all species →	Family	Translin family	Interproscan
IPR016068 all species →	Homologous_superfamily	Translin, N-terminal	Interproscan
IPR036081 all species →	Homologous_superfamily	Translin superfamily	Interproscan
IPR033956 all species →	Family	Translin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10741 all species →	TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0016070 all species →	Biological Process	RNA metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_033792-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.