Detailed information of FUN_033881-T1 in Acropora pulchra

Genomic Location: ptg000024l:2215965...2221428
NR annotation: XP_029189987.2, LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 3-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009777 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637
all species →		Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF07525
all species →		SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR001496
all species →		DomainSOCS box domainInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050842
all species →		FamilyCul2-RING E3 Ligase Substrate-Recognition Fem-1Interproscan
IPR036036
all species →		Homologous_superfamilySOCS box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24173
all species →		ANKYRIN REPEAT CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0035556
all species →		Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_033881-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP