Gene detail

Detailed information of FUN_033913-T1 in Acropora pulchra

Genomic Location: ptg000024l:2661769...2666310
NR annotation: XP_044184046.1, ras association domain-containing protein 8-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_033913-T1

ATGAATGAATGGAGTTCGAAAACAAGTAATCCGAGAGCATTGATTGGAAAACTCACACGATTTGATAAGGGAATTCGTAGTCTTTTCGAGCAGGCCATTTTTCCTAATGATGGTTCTCCGAGGATCTTTTCAAACTTTAAGGGCAGTCCTATTGATCGCCGCGAAATCCAAACTTATCCCGAGTGGAAGGTGCAGATGTGTTTTAGAAACTTGAGCAGGCACCATAGAAAGAGATCTAGCCGCAAGATAATTTATATTTTACCAATTGGGCCCTTCACTGAAGCAGTATGGAAACCAATTGAAGGATTGCAAATCTCTGCGTTTGAACTTCTTGCAAATTTCTTGAGAACTTTCTTTCAAGGAATGGACTTAAAAATTATGGATCAAATTCTCGTCTCTGAGGTAAATTGCACACGAAGGATACATACTGTCACTGGAAAGCTTCAGTTATTGGCATCAGATATGTTGCGTCACTTAAAGTCCTCTCTTCCTCCTGATGGTTACTGTATTATTGGTATTTGCTGGGTTGATTTGTACCCTGATGCGCAGTGGAACTTTGTCCTTGGTGAATCATCTTGTACTGATGGCTGTGCTGTGATGAGCTTTGGTCATTTTGAACCACAATCGTTTATCAAAAAACAGCAAAACCAGGTCCAAGTTAAAATTAATGCAGATCATAAGTTGCAAAAGAATTTCTCTCTCCTGTACAACAGAAATTGTATTGGCCAGAAACTCTTTGTGGAGGAGTTTACTGATGCTTTTGAAATCAATAAGGAATTGATCTGGAGACTTTTTAGGGTGTCTAGTCATGAGCTTTGTCATGTATTTGGATTTTCACACTGTGCCTATTTTGCATGTGCCATGAATGAGAGCAAGTCCATCTCTGAGGCAGAAAATCAGCCACTGTTCCTTTGCCCTGTTTGTTTGCGCAAGCTCGAAAAAGCCTTATGCTTTGATACTGTGGAAAGAGTTTGGGTTGATGGAGTTCAACGTGTTGTTCGTGGCGCTAATGAAGAGACCACTTGTGAAAATATATTGGTCGCCGTTGCAAATGCTACAGGAAAACTTGGAAGGTTTGCCCTGCTTGAAAAATGGCGGGACCTTGAACGAATTTTGCCTCGAGAGGCGAAGCCGATTCAATGCCTACGAATGTGGGGAGATCAGGCGCGGGAAGTGAAATTTGTTTTAAAATTAATGGAGGATAAAACGACGCATGGCTTTAGTAAATTAGTGGATGTGGATCAAGGAAACCATGATGGTAACTTGGTGTTCAGCAAGGACCCTTTTTACAGTTCATCAAAGAAGTCCTCACTCGAAAAAATTGTTGCGAATCAGTCGGGTAAACTCAAACGACTGGAACGTGACATGGAAATAATACAATTACGGATTGACTCTTGTGTTGAGGACGAAGAGAGTTATCTATATTTTACCAAAGAGGAAATTGATGAAGATAGAATTACAAAGCTTGGACAGGTGTTGAAATTGCAATCGAAAGAGTTAGCGACGGAGCAAAATTGTTTCAGTGAATTAGCTAAAGGAAGCCGGAAACACGAGAACCTTCGTCAAGAACTTCGAGATCAGCGAGATAAACTCGATCATTTAGATGTTCACATTTCGGATTTAGAAAACGTAGGTAAGAAAATATTTGCGATGCGTTCTTCACATAACAAGAAACCAGACTCCAGTGAAAGATCAACAAACGGTGATGGAGAGTATTTGGAGGAACTTGCTCAGGAAATTTCAGTGACCCGGGAAGAACTGATGAAACAACGAGAACTCGCCGAGAGGCAAGTCGAGGAAGTAACATTGATGAAAAAATCATTGGCCGATGTCGAGCATCTTTCCCGGCGAAAAACGTCCCATTTGTTGACAATGATAGGCGATGCCTCACCGGAAGTGAGCTTGTCATATTACGATTTGGAAAAGCACCTAGCATTGGACGAGGGCTCCGTCGCTTGCGCGCCCAGTGTAAGTCGCTACTCTAATACATCTTCACCAGTCGCTAATTCTCAATCGTCATTCCAAAACGGGACACCGAAATCTTCACCTAGAGAGAAATTTTTACTCGATGAGTTAGATGCTTTGGATGATCAAGGAGTATTTGTTTGA

Transcript

FUN_033913-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R4A6	Archaemetzincin-2 OS=Pongo abelii OX=9601 GN=AMZ2 PE=2 SV=1
Q8CJ96	Ras association domain-containing protein 8 OS=Mus musculus OX=10090 GN=Rassf8 PE=2 SV=1
Q8NHQ8	Ras association domain-containing protein 8 OS=Homo sapiens OX=9606 GN=RASSF8 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011133 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07998 all species →	Peptidase_M54	Peptidase family M54	Family	Interproscan
PF21801 all species →	ASPP2-like_RA	Apoptosis-stimulating of p53 protein 2-like, N-terminal RA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012962 all species →	Family	Peptidase M54, archaemetzincin	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR048942 all species →	Domain	Apoptosis-stimulating of p53 protein 2-like, RA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15910 all species →	ARCHAEMETZINCIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_033913-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.