Detailed information of FUN_033967-T1 in Acropora pulchra

Genomic Location: ptg000024l:3220240...3230792
NR annotation: XP_044185118.1, elongator complex protein 4-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5XG58Elongator complex protein 4 OS=Xenopus laevis OX=8355 GN=elp4 PE=2 SV=1
Q566Y1Elongator complex protein 4 OS=Danio rerio OX=7955 GN=elp4 PE=2 SV=2
Q96EB1Elongator complex protein 4 OS=Homo sapiens OX=9606 GN=ELP4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006371 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05625
all species →		PAXNEBPAXNEB proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008728
all species →		FamilyElongator complex protein 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12896
all species →		PAX6 NEIGHBOR PROTEIN PAXNEBInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588
all species →		Cellular Componentelongator holoenzyme complexInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008023
all species →		Cellular Componenttranscription elongation factor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11375ELP4; elongator complex protein 4-Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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