Detailed information of FUN_034050-T1 in Acropora pulchra

Genomic Location: ptg000024l:4161225...4171510
NR annotation: XP_029185116.2, PHD finger protein 21A-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96BD5PHD finger protein 21A OS=Homo sapiens OX=9606 GN=PHF21A PE=1 SV=1
Q6ZPK0PHD finger protein 21A OS=Mus musculus OX=10090 GN=Phf21a PE=1 SV=3
Q8C966PHD finger protein 21B OS=Mus musculus OX=10090 GN=Phf21b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004305 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24102
all species →		PHD FINGER PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for FUN_034050-T1 in Acropora pulchra.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_034050-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP