Detailed information of FUN_034102-T2 in Dendrogyra cylindrus

Genomic Location: contig_111:550842...612467
NR annotation: XP_027043789.1, dystrophin-like isoform X2 [Pocillopora damicornis]
Species abbreviation DCYLI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O97592Dystrophin OS=Canis lupus familiaris OX=9615 GN=DMD PE=2 SV=1
P11530Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2
Q5GN48Dystrophin OS=Sus scrofa OX=9823 GN=DMD PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001553 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00569
all species →
ZZZinc finger, ZZ typeDomainInterproscan
PF09068
all species →
EF-hand_2EF handDomainInterproscan
PF09069
all species →
EF-hand_3EF-handDomainInterproscan
PF00435
all species →
SpectrinSpectrin repeatDomainInterproscan
PF01477
all species →
PLATPLAT/LH2 domainDomainInterproscan
PF00397
all species →
WWWW domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159
all species →
RepeatSpectrin/alpha-actininInterproscan
IPR001024
all species →
DomainPLAT/LH2 domainInterproscan
IPR001202
all species →
DomainWW domainInterproscan
IPR036020
all species →
Homologous_superfamilyWW domain superfamilyInterproscan
IPR000433
all species →
DomainZinc finger, ZZ-typeInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR036392
all species →
Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR015153
all species →
DomainEF-hand domain, type 1Interproscan
IPR015154
all species →
DomainEF-hand domain, type 2Interproscan
IPR043145
all species →
Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR002017
all species →
RepeatSpectrin repeatInterproscan
IPR035436
all species →
FamilyDystrophin/utrophinInterproscan
IPR050774
all species →
FamilyKCMF1 and DystrophinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12268
all species →
E3 UBIQUITIN-PROTEIN LIGASE KCMF1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0099536
all species →
Biological Processsynaptic signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10366DMD; dystrophin-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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