Detailed information of FUN_034111-T1 in Acropora pulchra

Genomic Location: ptg000024l:4989773...4999161
NR annotation: XP_029192162.2, tetratricopeptide repeat protein 5-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0P5H9Tetratricopeptide repeat protein 5 OS=Bos taurus OX=9913 GN=TTC5 PE=2 SV=1
Q8N0Z6Tetratricopeptide repeat protein 5 OS=Homo sapiens OX=9606 GN=TTC5 PE=1 SV=2
Q99LG4Tetratricopeptide repeat protein 5 OS=Mus musculus OX=10090 GN=Ttc5 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006658 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07719
all species →		TPR_2Tetratricopeptide repeatRepeatInterproscan
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF16669
all species →		TTC5_OBTetratricopeptide repeat protein 5 OB fold domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013105
all species →		RepeatTetratricopeptide repeat 2Interproscan
IPR038645
all species →		Homologous_superfamilyTTC5, OB fold domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR032076
all species →		DomainTetratricopeptide repeat protein 5, OB fold domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR26312
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_034111-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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