Detailed information of FUN_034120-T1 in Acropora pulchra

Genomic Location: ptg000024l:5092968...5112124
NR annotation: XP_044184327.1, acyl-CoA synthetase short-chain family member 3, mitochondrial-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0G2K047Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acss3 PE=1 SV=1
Q14DH7Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Mus musculus OX=10090 GN=Acss3 PE=1 SV=2
Q5REB8Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Pongo abelii OX=9601 GN=ACSS3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000999 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan
PF16177
all species →		ACAS_NAcetyl-coenzyme A synthetase N-terminusFamilyInterproscan
PF13193
all species →		AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR032387
all species →		DomainAcetyl-coenzyme A synthetase, N-terminal domainInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan
IPR025110
all species →		DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR020845
all species →		Conserved_siteAMP-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43347
all species →		ACYL-COA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005759
all species →		Cellular Componentmitochondrial matrixInterproscan
GO:0050218
all species →		Molecular Functionpropionate-CoA ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01908ACSS3, prpE; propionyl-CoA synthetaseEC:6.2.1.17
Lipid biosynthesis proteinsko01004deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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