Detailed information of FUN_034258-T1 in Acropora pulchra

Genomic Location: ptg000024l:6741577...6746424
NR annotation: XP_029210463.2, NACHT, LRR and PYD domains-containing protein 14-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A386CAB9NACHT, LRR and PYD domains-containing protein 1 homolog OS=Danio rerio OX=7955 GN=nlrp1 PE=1 SV=1
Q96MN2NACHT, LRR and PYD domains-containing protein 4 OS=Homo sapiens OX=9606 GN=NLRP4 PE=1 SV=3
P33076MHC class II transactivator OS=Homo sapiens OX=9606 GN=CIITA PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011570 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF17779
all species →		NOD2_WHNOD2 winged helix domainDomainInterproscan
PF05729
all species →		NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050637
all species →		FamilyNLRP family, innate immunity and inflammation regulatorsInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR038359
all species →		Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR041075
all species →		DomainNOD2, winged helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45690
all species →		NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_034258-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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