Detailed information of FUN_034280-T1 in Acropora pulchra

Genomic Location: ptg000024l:6986635...6994506
NR annotation: XP_029210961.2, autophagy-related protein 13-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SYE0Autophagy-related protein 13 OS=Danio rerio OX=7955 GN=atg13 PE=2 SV=1
A5A6N3Autophagy-related protein 13 OS=Pan troglodytes OX=9598 GN=ATG13 PE=2 SV=1
Q91YI1Autophagy-related protein 13 OS=Mus musculus OX=10090 GN=Atg13 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007584 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10033
all species →		ATG13Autophagy-related protein 13FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018731
all species →		DomainAutophagy-related protein 13, N-terminalInterproscan
IPR040182
all species →		FamilyAutophagy-related protein 13Interproscan
IPR036570
all species →		Homologous_superfamilyHORMA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13430
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006914
all species →		Biological ProcessautophagyInterproscan
GO:1990316
all species →		Cellular ComponentAtg1/ULK1 kinase complexInterproscan
GO:0000045
all species →		Biological Processautophagosome assemblyInterproscan
GO:0000407
all species →		Cellular Componentphagophore assembly siteInterproscan
GO:0000423
all species →		Biological ProcessmitophagyInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0034497
all species →		Biological Processprotein localization to phagophore assembly siteInterproscan
GO:0034727
all species →		Biological Processpiecemeal microautophagy of the nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_034280-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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