Gene detail

Detailed information of FUN_034338-T1 in Acropora pulchra

Genomic Location: ptg000024l:7818065...7832597
NR annotation: XP_029210839.2, eukaryotic translation initiation factor 3 subunit M-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SPX9	Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis OX=45351 GN=v1g192238 PE=3 SV=1
Q7L2H7	Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=EIF3M PE=1 SV=1
Q99JX4	Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005466 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18005 all species →	eIF3m_C_helix	eIF3 subunit M, C-terminal helix	Domain	Interproscan
PF01399 all species →	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045237 all species →	Family	Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR040750 all species →	Domain	eIF3 subunit M, C-terminal helix domain	Interproscan
IPR027528 all species →	Family	Eukaryotic translation initiation factor 3 subunit M	Interproscan
IPR000717 all species →	Domain	Proteasome component (PCI) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15350 all species →	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002183 all species →	Biological Process	cytoplasmic translational initiation	Interproscan
GO:0005852 all species →	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15030	EIF3M; translation initiation factor 3 subunit M	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.