Detailed information of FUN_034457-T1 in Acropora pulchra

Genomic Location: ptg000024l:8999346...9012973
NR annotation: XP_044167079.1, LOW QUALITY PROTEIN: DNA-dependent protein kinase catalytic subunit-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8WN22DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1
Q8QGX4DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
P97313DNA-dependent protein kinase catalytic subunit OS=Mus musculus OX=10090 GN=Prkdc PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001506 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08163
all species →		DNAPKcs_CC3DNA-dependent protein kinase catalytic subunit, CC3RepeatInterproscan
PF19704
all species →		DNAPKcs_CC5DNA-PKcs, CC5RepeatInterproscan
PF20502
all species →		DNAPKcs_CC1-2DNA-dependent protein kinase catalytic subunit, CC1/2RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012582
all species →		DomainDNA-dependent protein kinase catalytic subunit, CC3Interproscan
IPR045581
all species →		DomainDNA-dependent protein kinase catalytic subunit, CC5Interproscan
IPR046803
all species →		DomainDNA-dependent protein kinase catalytic subunit, CC1/2Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
No PANTHER signature was detected for FUN_034457-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006303
all species →		Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_034457-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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