Detailed information of FUN_034484-T1 in Dendrogyra cylindrus

Genomic Location: contig_115:324571...334513
NR annotation: XP_027059071.1, CLIP-associating protein 1-A-like isoform X1 [Pocillopora damicornis]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99JD4CLIP-associating protein 2 OS=Rattus norvegicus OX=10116 GN=Clasp2 PE=1 SV=1
Q8BRT1CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1
O75122CLIP-associating protein 2 OS=Homo sapiens OX=9606 GN=CLASP2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001513 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_034484-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR034085
all species →		DomainTOG domainInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21567
all species →		CLASPInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000226
all species →		Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000776
all species →		Cellular ComponentkinetochoreInterproscan
GO:0005815
all species →		Cellular Componentmicrotubule organizing centerInterproscan
GO:0005876
all species →		Cellular Componentspindle microtubuleInterproscan
GO:0005881
all species →		Cellular Componentcytoplasmic microtubuleInterproscan
GO:0008017
all species →		Molecular Functionmicrotubule bindingInterproscan
GO:0040001
all species →		Biological Processestablishment of mitotic spindle localizationInterproscan
GO:0045180
all species →		Cellular Componentbasal cortexInterproscan
GO:0072686
all species →		Cellular Componentmitotic spindleInterproscan
GO:0090307
all species →		Biological Processmitotic spindle assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16578CLASP1_2; CLIP-associating protein 1/2-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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