Gene detail

Detailed information of FUN_034540-T2 in Dendrogyra cylindrus

Genomic Location: contig_115:1089350...1093539
NR annotation: KAJ7388524.1, RAD52 motif-containing protein [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4R856	RAD52 motif-containing protein 1 OS=Macaca fascicularis OX=9541 GN=RDM1 PE=2 SV=1
Q8NG50	RAD52 motif-containing protein 1 OS=Homo sapiens OX=9606 GN=RDM1 PE=1 SV=1
Q9CQK3	RAD52 motif-containing protein 1 OS=Mus musculus OX=10090 GN=Rdm1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009503 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04098 all species →	Rad52_Rad22	Rad52/22 family double-strand break repair protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042525 all species →	Homologous_superfamily	DNA repair protein Rad52/59/22 superfamily	Interproscan
IPR041247 all species →	Family	Rad52 family	Interproscan
IPR040224 all species →	Family	RAD52 motif-containing protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31164 all species →	RAD52 MOTIF-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10874	RDM1, RAD52B; RAD52 motif-containing protein 1	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.