Gene detail

Detailed information of FUN_034626-T1 in Dendrogyra cylindrus

Genomic Location: contig_117:176768...178884
NR annotation: XP_020618662.1, PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q58A45	PAN2-PAN3 deadenylation complex subunit PAN3 OS=Homo sapiens OX=9606 GN=PAN3 PE=1 SV=3
Q640Q5	PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus OX=10090 GN=Pan3 PE=1 SV=4
A1L1C7	PAN2-PAN3 deadenylation complex subunit pan3 OS=Xenopus tropicalis OX=8364 GN=pan3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18101	Pan3_PK	Pan3 Pseudokinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030844	Family	PAN2-PAN3 deadenylation complex subunit PAN3	Interproscan
IPR041332	Domain	Pan3 pseudokinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12272	DEADENYLATION COMPLEX SUBUNIT PAN3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0008143	Molecular Function	poly(A) binding	Interproscan
GO:0031251	Cellular Component	PAN complex	Interproscan