Gene detail

Detailed information of FUN_035161-T1 in Siderastrea siderea

Genomic Location: contig_39:1520647...1524640
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR016202 all species →	Family	Deoxyribonuclease I	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11371 all species →	DEOXYRIBONUCLEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000737 all species →	Biological Process	obsolete DNA catabolic process, endonucleolytic	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0004530 all species →	Molecular Function	deoxyribonuclease I activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006308 all species →	Biological Process	DNA catabolic process	Interproscan
GO:0004536 all species →	Molecular Function	DNA nuclease activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_035161-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.