Gene detail

Detailed information of FUN_035247-T1 in Siderastrea siderea

Genomic Location: contig_39:2480774...2495769
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02878 all species →	PGM_PMM_I	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I	Domain	Interproscan
PF02879 all species →	PGM_PMM_II	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II	Domain	Interproscan
PF02880 all species →	PGM_PMM_III	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005841 all species →	Family	Alpha-D-phosphohexomutase superfamily	Interproscan
IPR016055 all species →	Homologous_superfamily	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III	Interproscan
IPR045244 all species →	Family	Phosphoglucomutase	Interproscan
IPR005844 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I	Interproscan
IPR005845 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II	Interproscan
IPR005846 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III	Interproscan
IPR016066 all species →	Conserved_site	Alpha-D-phosphohexomutase, conserved site	Interproscan
IPR036900 all species →	Homologous_superfamily	Alpha-D-phosphohexomutase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22573 all species →	PHOSPHOHEXOMUTASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016868 all species →	Molecular Function	intramolecular phosphotransferase activity	Interproscan
GO:0004614 all species →	Molecular Function	phosphoglucomutase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0071704 all species →	Biological Process	obsolete organic substance metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01835	pgm; phosphoglucomutase	EC:5.4.2.2	Streptomycin biosynthesis	ko00521	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.