Gene detail

Detailed information of FUN_035301-T1 in Dendrogyra cylindrus

Genomic Location: contig_123:152593...157212
NR annotation: XP_020607157.1, 39S ribosomal protein L46, mitochondrial-like [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H2W6	Large ribosomal subunit protein mL46 OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1
Q5RBU2	Large ribosomal subunit protein mL46 OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003482 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11788 all species →	MRP-L46	39S mitochondrial ribosomal protein L46	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021757 all species →	Domain	Large ribosomal subunit protein mL46, N-terminal	Interproscan
IPR040008 all species →	Family	Large ribosomal subunit protein mL46	Interproscan
IPR015797 all species →	Homologous_superfamily	NUDIX hydrolase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13124 all species →	39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_035301-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.