Gene detail

Detailed information of FUN_035441-T1 in Acropora pulchra

Genomic Location: ptg000025l:7472673...7479480
NR annotation: XP_015779992.1, PREDICTED: metal tolerance protein 11-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_035441-T1

CAACGCCTTCGAAGCTACACCCACAACGTGGATGTGGAGTTGTGGACATAAAACATATGGAACAAACTTGGGTAGCTGTCACTGACTAATTAAGGATTACAGATGTCCGGTTTTTAAACTGAAATGGGAGACCATAGTCCTTCAATTGCTCATTCCTTTTATGCACATGGAGGTTCCGATGGAAGTGTGCACATAGAAATTAATGCTCATCAAAATTCTTCATGCGTCACTATAGAAGAAATTGCACCACAGAACAACACAATATCCAATGCAAAACAAACATGGCTACCAAATGGCGTATGTTGTTTTGCAACATCAGTTGCGGATAAACGACTGTCTTCGACTGAGAAGAATGTCAGGAGATACTACAACAAAATGGAAGAGATTAAAGCTATTTTAGAAGATGTAAGTACCCAGGATCTGGAGCCTGCAGCTGATTTGTGTGCTCAAGTTAATAAGGACCACAGGGTTACCATTGCTGTTAGGATAAGTCTGTTTTGCAATGCTGCACTTCTTGTTGCCAAAGCAGTAGCATCATATTTATCTGGTTCAATGTCCATTATTTCTAGTTTAGTGGATAGTGCTGTCGATTTAATCTCTGGTGTTGTTGTGTGGTGGACGGCTCGTTCCATCAAAGGTGCTAATTACCATGAATACCCAGTGGGAAAAACACACTTAGAGCCTATCAGTATAATTGTGCTTGCAGTGATCATGGCAGTAGCATCCATACAAGTAATTATCTCATCCGTAACAGAAATGATTGAGCAGTCAGCTGATCCTGATATTTCAGTAACTACCATTGCTATCATTGGAGCAACAATTGCCATCAAAATTGCTTTATATTTGTACTGTTGCCGTATCAGGAACCCATCGACTACTGTGTTGGGACAGGATCATTTAAATGACGTTGTGTCAAATGTGGTAGCCCTGGGGTTTGGTTACATGGGTTTCAAATTATGGAAAAACATTGATCCAATTGGTGCCATTTTAATAAGTATTTACATATTTGCTGGATGGTATAAGACTGGCAGTGAACATGTTCGTGGGTTAACAGGCTATACTGCTTGCCCTGTCATTTTACAGAAGCTGCTATGGGTTTGTTTGATTCATGACCAAAGAATTTTATTTATTGATACTTTGAGAGGCTATCACTTTGGCCTCAACATCCTGGTGGAGGTCCATATTGTCCTTTCCCCCGAGATGCCTCTCCGTGAAGCCCATGATATCGGAGAATCACTTCAAACCAAATTGGAAAGATACCCTGAAGTTGAGAGAGCCTTTGTCCATATAGATTATGATTATGAGCATGACCCAGGTATTGAGCATCATACAGAACGTTTCCCAAGACAGGTTTGATAATTACTGAAAGTTATAATTTAGATTGTTCTGTTGGGATGAATGGTTGTACTGTACTTGGGTTGGTTGTTTCTTTTTGTTTGATGAACCTGACAAAAGGTAACAGCAAGGGAGAAAGGAAGACTTGTCTGAAAACAAATTTCTCTTTTATATTTTAGACTTTTATTATATCAATATTTATATTTTTATAATTAAATTGAGATATTACAAGGGAATTAATTGCTTAAAAATCTGATTTATTTTGCTTGTAAACTCTTATGTCATTCATAATCACACGTCGCACCATGAATGGAAAGGGAGGAGCTGAACCCCTGCATTCAATACCACATTTCTGGTTTTAAATTTGTTTTGGAGGGGAGGGGAGGGGAGGGGGTATTTTCAAGCCAATAAGGGTTTGAAAAAGGGCTAAGAGATTCCAGTGCAATAATTGTTAACAGAAACAGAACAATAGAAACTATGAACTTTTGGCAATGGAATATACTGTACTTTCCTTTTCTTTCTTATAATTTGGAATCAATTACTGAGGTGAGAAAAGATTCAGCTGGCTTTCTCATCCCCTATTTCATTACAGAGACATTTTGTTTGACTTTTTGCTCCTGGGATTTGTGCGGGTGATTTCAACTCTCTGGTTTCCTTTGTTGGTCTCGGAAAAATAAAAAAAAAAACAAAACAAATCAAACAAACGAAACAAAAAAATCTACCAAAAAAGATGCTTTTTCAATATGTTTGAAGCGTTTCCTGTGGCTGTGTAAACAAATTTGCAGTTTTACCCATCATCGAAGATTTGTCTAGGATTTCATAGTCATCATATTTATGAAGTGAAGCTATGATCCTCGCAGTTGTGGAAGCAATTTTAGCAATTGCATAGAGAAGCCACAAAAAATTGAAGATTTCAGTGCGGTTTGAACCCGTGAACCCACGGTGCCTGTGAGACGCTCCAACCTAGTGAACTATGAAACCACAGATGGTGGAGTAAGTTTCAGTTGAAGTGTAATGAAGCCCCCGATGGTGGGACCAGCTGCCACCATCAGTGACTTCATAACCAAGGACACATATCCAGGGAGCACGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5NA18	Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1
O80632	Metal tolerance protein 11 OS=Arabidopsis thaliana OX=3702 GN=MTP11 PE=2 SV=1
Q0WU02	Metal tolerance protein 10 OS=Arabidopsis thaliana OX=3702 GN=MTP10 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007789 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01545 all species →	Cation_efflux	Cation efflux family	Family	Interproscan
PF16916 all species →	ZT_dimer	Dimerisation domain of Zinc Transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036837 all species →	Homologous_superfamily	Cation efflux protein, cytoplasmic domain superfamily	Interproscan
IPR050291 all species →	Family	Cation Diffusion Facilitator Transporter	Interproscan
IPR002524 all species →	Family	Cation efflux protein	Interproscan
IPR027470 all species →	Domain	Cation efflux protein, cytoplasmic domain	Interproscan
IPR027469 all species →	Homologous_superfamily	Cation efflux transmembrane domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43840 all species →	MITOCHONDRIAL METAL TRANSPORTER 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008324 all species →	Molecular Function	monoatomic cation transmembrane transporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0006812 all species →	Biological Process	monoatomic cation transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_035441-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.