Gene detail

Detailed information of FUN_035477-T2 in Acropora pulchra

Genomic Location: not available for this species
NR annotation: XP_029202273.1, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Sequence

CDS

Transcript

FUN_035477-T2

GCAAGAAGCGCAAGTAAAGTTCTCTGAAGTCTCTTGAATTTAAGAATTCGATGGAAAACACTCCTCTGGCCTGAAAATGAGTGCGAGAGAAAATGTTTACGGCCCAGGGCCTGACAATGCGTCTGGGATTGCTATCGGTGAAGAAATGGGGCCGATCATCACCGCTTTGAAGGAAGGTAGTGCAATGACAAGGTACTACTCCAACAGAAGGCAATCGGATGTCAGGATTTTCAAATTGAAAATGGAAGAGTTTCAGCTGGTATGGTGTAGGAAGGAGGGAGCAAGAGAGGAGGACTCAGTTTTTATTCGAGAGATCAAGGAAGTTCGCCGAGGTTTAGGATCCAAAGATTTTGACAGAAATGCGGACGCGGCCCGAAGACGTGATCCAAACCGTTGTCTTGTGATTTTGTATGGCACTGAATTCAAACTAAAGACTTTGAGTCTTGTTGCCCACAGTCATCAAGAGCGAGAATTTTGGGTGAAGGGTCTTGTGTATTTGATGTACGAAAGTTTGATTGCTACTCAAGCCGTGCTGATACACAGATGGCTGTTACGCGAATGGAATGGTATTTCAGCCCTTGCAAACACAGCAAGGAAAGGCCCCAGCTCTATAGAGATGCCCATTTTGATCGGTATGAGGGAGCTACGGGCATTTTTTCAACGTGTGAATGTAAAACTGAGCAATGCAAAATTGAAGGAGCTTATCCAGATTGCGGGAAGAGGGGATAGCCATGTCAATTTTGAGGGATTTCGCAAAATTTATGATTCAATGATGACTGTTAAAGAATTAGTAGTACAGTTTTCTGATTACATTGAAAATGGTACCTATGTTCCTTTGGTCAACTTTCAAAGGTTCCTTTTGGAGGAGCAAGAGGAACCTGGGGCAAAAGACCTTGAAACTGTACAAAGCTATATGTTGGAATATCTGTCTGATGGTAGTAGAAGTTACAGTGAGCCCTATTTCACTGTTTCGGAGTTTTTGGATTACCTGATGTCAAAAGGTAACAGTGCCTTTAATTCAGCACACTGTGAGGTGTATCAAGATATGACGAAACCTCTTACCTTTTACTGGATTGCTTCATCACACAACACGTATCTAACAGGGGATCAGTTCCAGGGTGAATCCTCTGTGGAAGCCTACATCCGTGCTCTCAGAATGGGCTGTCGCTGTTTAGAATTGGACTGCTGGGATGGTCCAGATGGTCTACCCATCATCACGCATGGACATACACTTGTTTCCAGAATCAAATTTGTTGAAGTTGTGCGTGCAATCAAGGACAATGCATTTGTTGCATCTGAGTAAGTTTTGTGGTTGATTGCTCTTTTCGAATGGTGGCCTTTGAAATTTAAATCACTTTTTCTCATCTTCTGATACAATGCTTAAACAGAAAGCAGTTCATTGTTTTGTGAAGAGAGCAGAGTACATTGGAGTTAAATTAATATTGACATGTTTTCTTCAGTGGAATAGGCTGCAGATACCTTTAAGGTTTGTTTTTGCATCGTTGCAATGCAAAAAAAAAGTAAACAAATAAAATGGTATGGTATTTTATTTTCTATCTCCAGCTACCCATTGATTTTGTCACTGGAGAACCACTGCAGCATTCCTCAACAGAAGGTTATGGCACAGACTTTCCAAGATATTTTTGGAGGTTTGCTGAAATAAGTTACAGTGCACTTAAATTCTAAAGAGTCTGTGATGAGAAGTACAGTACACTACTGGGTTAGGATTTCTCCCCTGATGGTCACAAGTCATTATTCTTGATGTTGGTATACTCTTTCTGAAATCAATTTTCTAGCCTTTGGTGAAGTTCACTATGAAACTTTGTTTACTCAGAAGTTTCCTTTTTTTAAACAAAAAATAATCAAAGAGCAAAAATCAATAAAGAACCAAAAACTTCTGTACCTGCCTTGTAGTGATGGCTTTATCTCCCAAGACCAATTCGAATAGTTAGACACATTTTGAGAGAAGGATTTTACAATTTTATTTAGTGCTAAAGTAGGTTGATTGTATCTATCATCCTTTTGTAAAATTTGCTGCGAAATTCTCAACTAGGTAAATGTTTGACCCATAAATATTTGAACCATAGAATAGTCTGGAATTTCCACCAAATTTACAATAATTATTTCTTGTACCAAGAGAGAAATGCATGACCTTTACCTATAATTGCAAAATCCTTCATGTGTTATAGAGAAGAAATGAGCTGTTGGTTTGATTGATTCATTGATTGATTTGATAAAATAATGTAATAATAACTGCTTCATTGCTGACAGACTGTCTCCTCTCACAACCAATTGATGGTAATGCAAAAGAAATGCCATCCCCTACTGCTTTGAGGAACAAAATTATACTCAAGGTAAGTGAATTTGTTGTGTACTGTAGCTTTAAAACAATAAAGTGGAACTCTCAACTGGTTGAGTGAAATGAAGGAAGTTAATAGTATTTTGCCACAGATTTGGATGAATAAAATAAGGCTGTTGTTTTGTTGTGAGTTCAAGACCCTTACTTCACCTCCCCAATATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08487	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Bos taurus OX=9913 GN=PLCG1 PE=1 SV=1
P19174	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Homo sapiens OX=9606 GN=PLCG1 PE=1 SV=1
Q62077	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Mus musculus OX=10090 GN=Plcg1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002630 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00388 all species →	PI-PLC-X	Phosphatidylinositol-specific phospholipase C, X domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001192 all species →	Family	Phosphoinositide phospholipase C family	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR000909 all species →	Domain	Phosphatidylinositol-specific phospholipase C, X domain	Interproscan
IPR017946 all species →	Homologous_superfamily	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10336 all species →	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004435 all species →	Molecular Function	phosphatidylinositol phospholipase C activity	Interproscan
GO:0010634 all species →	Biological Process	positive regulation of epithelial cell migration	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0048015 all species →	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0051209 all species →	Biological Process	release of sequestered calcium ion into cytosol	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0008081 all species →	Molecular Function	phosphoric diester hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_035477-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.