Gene detail

Detailed information of FUN_035638-T1 in Acropora pulchra

Genomic Location: ptg000025l:10199837...10207800
NR annotation: XP_029195118.2, HAUS augmin-like complex subunit 4 isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_035638-T1

AGGTTATGGACTTCGCATGAATGCTTGTTGAGCATACTGCTCAGCAATGGAAGATTTTTAGAAAGAAACAGCAGAAAGTGGGCGCTATCTACAGACACTCTTGAACCTTACGATGTTATCATCACAAGAAACGGCTGACAAATTAAACAGCAGTTTGCCCATTAATTTAACCACTTCCCACGTGCAACAGTACCCTGACTTTGTAAAATTGCTGTCGTCTTTGACCAGCCATGTGACAGATAGTGGAATGTCATTTTCAGTTCACAAAGATATGAAACAGGCAGAAGATTCCTTAAGACAACAAAAGCTAAAGTATCTTCAACTCTTAGCATTGTACTCTGAGCTGAAAGAAATGTTGATAGATTACGACATAAAGAAACAAGAAATCCACCCCGGCTCAAACACTGCACAGCTGTTTGAGACACTCAAGGAATCTCTTGCCCAAGCCGAAGCATTGGACTACCTTGATTTTCACCCTGAGGGTGGAGAAAGATCTGTCAGCCTTCTGGGTTTAAAAGCTGAACATATCATCAGCCAATGTCACAAGAAGTCCCTTCATCAAGGCATCATTCCGGAGTTGGAGTCACGATTGAAGAGCAAGTGTGAGACAGTGGCCAATTTTTACAAACCAGAAAAGCAAAATGATAGTCAGCTTTTATTTGCGAAAGCCACTCAGCTTCCTGCGTTGCTTGAAAACGAAAAACAAACAGTGGACCAAGAGATCAAACAGCTTCACCACAACAGAATGTTAAGAGATAAACAATTCAGGCAGCTGTTTGAGGTTCTGATGCAGTCGCTCCGGACTTTAGAGAGTCTTATAGCAGACCACAAGTTGCAGTCCCAGGTTAAACATGATCGTGTGACAGCAGAATGGCTGACTGCTAAATGCGATGCCATGTGCCTGAAAGTGAGAGTTCTTCAAAATCAAATGATCAAAGATACGTACACGCCAGAAGCCGTTGCCGCGCTGAAAAGGATCAAGGCCTACCTAAAAGATGCGGAAGAGCAGAGTGCCGCAGAACTTCACCGTCTGAGTCAAATGCTTATAGCTTACGAGTCTGTTGGAATGGGATTTGATGCGCTTGTACAGCAATACGCAGCACTGATGGCTGAGATAGATAACAAAAAATGGGCACTCAGCGAGTTAAGACAAACTCAGGACGACGATTTGGGCGACTTGTGGAATCAGCGATGATCGGGCACTGCAGTCCCGCTGTTGTTATTCGACCCGTGAACTGACGTGTGTAAAATCGACTTTGGTATTACGAGCAAGAAGCAAATGACATATCCAAAGATTCCCGCTGTTGTTATTCGACCCGTGAACTGACGTGTGTGAAGTCGACTTTGGTATTACGAGCAAGAAGCAAATGACAAATCCAAAGATATGTCAAGTAACTTGGACGACAAAAATTTCTACCAATAACACAACTTCGAGCTAGCGAGGGAGCAGCGAAGCGGCGAGGGGATTGGGGCATGGAAATTTCTCATATCGCTAGCTTCAATCCCCCTGCGGCCTCGCCGCTCCCATACTCAGACCGAAAAAACCGTCAGCAACGCAGGCTACCTCCTTTAAACAATTAAACTGTGGAGCTGCGTCGGTGGGAGAGTAAAACATGAAAATTTGAATATAGTGCTGAGTCTTATCAAGGGAGATTTTCAATGTTATTATTTGAAATCTGATTTAAGACAATTTGTTTTCGGCGGACCCGTGAGCATTTCGTCGACGCGACCTCGTGGTTTTTCAAACAAACGGCATGTGTTTTGCGCCCTGTAGACTAGACACTTAACGTCTTAACATGCTTTGAGGAATCACGATCAAACGAAACAACCATCGATACTGGAAAAGTGCATGCTGACAATTTTCGTCAGAGAATTTTAGTCAGAATCATAGACCATGATTCCGAGAAGTATGCGTGCCCAAAACGGACAGAGTATCGAGATTTGTACATGTACATGAAGTTTTTCATTTATAATAAAAATTTCAATATCAAGATCGATATATGTGTATCAAGATTACATAATTATACATCAAGATTTGCAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8GYM3	AUGMIN subunit 4 OS=Arabidopsis thaliana OX=3702 GN=AUG4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006201 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14735 all species →	HAUS4	HAUS augmin-like complex subunit 4	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029327 all species →	Family	HAUS augmin-like complex subunit 4	Interproscan
IPR026214 all species →	Family	HAUS augmin-like complex subunit 4, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16219 all species →	AUGMIN SUBUNIT 4 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan
GO:0051011 all species →	Molecular Function	microtubule minus-end binding	Interproscan
GO:0051225 all species →	Biological Process	spindle assembly	Interproscan
GO:0070652 all species →	Cellular Component	HAUS complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16587	HAUS4, AUG4; HAUS augmin-like complex subunit 4	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.