Gene detail

Detailed information of FUN_035653-T1 in Acropora pulchra

Genomic Location: ptg000025l:10334991...10344278
NR annotation: CAH3194598.1, unnamed protein product, partial [Porites evermanni]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q568Z7	Calcium and integrin-binding family member 2 OS=Rattus norvegicus OX=10116 GN=Cib2 PE=1 SV=1
Q9W2Q5	Calcium and integrin-binding family member 2 OS=Drosophila melanogaster OX=7227 GN=Cib2 PE=3 SV=3
Q9Z309	Calcium and integrin-binding family member 2 OS=Mus musculus OX=10090 GN=Cib2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002832 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF03131 all species →	bZIP_Maf	bZIP Maf transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051433 all species →	Family	Calcium and Integrin-Binding	Interproscan
IPR004827 all species →	Domain	Basic-leucine zipper domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR008917 all species →	Homologous_superfamily	Transcription factor, Skn-1-like, DNA-binding domain superfamily	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR004826 all species →	Domain	Basic leucine zipper domain, Maf-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45791 all species →	CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0055074 all species →	Biological Process	calcium ion homeostasis	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_035653-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.