Gene detail

Detailed information of FUN_035786-T1 in Dendrogyra cylindrus

Genomic Location: contig_129:134556...161033
NR annotation: XP_020621604.1, rho GTPase-activating protein 32-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_035786-T1

AAAACAGAACTCTTgttattaacaaaaaaaattaagcaaaaaGACTTGTACGGCGGAAACCACTCTATCGTAGCTGTTTCGCAATTCCCGGGTTAAATCGTATGACTCGAGGCGCTTGACGTAGGAATGAATTTCTTCCGCTTCGTGTAGCGTGTCCGCTTTGTAATTCCACATGGAAGCATTTCAGAAATCCAAAAATGATTGATAACAATTAGTTCATCGAGGCAAAGATTTCACCGTCGCTGGCAGATTTTTATTCATCTTTCTACGTGTCtcttttaaaagaaaactttgTTTCATTTGTTGCAACACTGTTGTTGCAGGTCGGTGGCATCATATCTGTGATTGATATGCCCCCAGTGGACGAGAGTCTGTGGTGGAGAGGCAAGCAAGGGTTTGAGGTCGGTTTCTTTCCAAGTCAGTGTGTTGAAGTTATTGGCGACAAAACGGACGGGCGTGCATCGCTTCCAGGCCACACGGCCCCTTCACACATGACGCCAGTTGCCAAGAAGCGAGGGAAAATTGTGTCTTTTTTGAGGTTGTTCTTGTCTTCTCGACCTTCGAAGGCACGGCTGATGCAGAGTGGTATCCTAAAGGAACGGACGTTTGGTTGTGACTTGGGCGAACATTTGGCAAAAACGAACAACCAAGTTCCTCTGGTGTTGACGAAGTGCGCTGAAGTAATAGAAAAGAATGGTATCGTCGATGGAATTTATCGTCTCTCTGGCATGTCTTCGAACATTCAGAAACTCAGGTTGGCATTTGACGGAGACGAGCCACCCGACCTTATGAAGGACTGCTATATCCGGGACATTCACTGCATCAGCTCTTTGCTCAAGATGTACTTCAGAGAACTTCCTAATCCGTTACTAACATATCATCTTTACGACAATTTTGTGGCCGCTATCCAAATAACAGACGAATCGGAGCGTCAAATTGCCGTCCATCACGTGGTACAGCAACTTCCACCACCGCACTacagaacactcgagtttctgTTACGTCACTTGTCACATGTCGCCTCGTACTCGCCCCAGACCGGCATGCACGCCAAGAACCTTGCGATTGTGTGGTCACCAAACCTCTTGCGGCCGATGTCCCTGGACGGCGGAGGCGCGGCTCTACTGCAAGTCAACGTGCAAGCTATCATAATAGAATACCTTATAAGGAATGCGCATGTGTTTTTTGACGAGCACGCTGCGGCGGCGGCGATCGTGGCGAACCCGCGTTACTCTGACAGTTCATTGGACAGACAACGAAAAGTGGTCTCAGATAGCGATATTGCCGGAGCCCCTTCCATTGGTCCAAGGATGGCTTCATTGTCTATTTCCCCGCCAACTAAACTAATATCACTTGAAGAGGCCCGTGCTCGTGCCCAGACGACGCCTTCGAGGACCACAGCGAGGTACGTGCGAGCCACGGCAGTGCAAACCCCTGAGCGATCCGAGCCCCCCATGTACCGGACATCAGTGGAAGTTCCTGCAAGACGTAAGACAAGCGATGGTGCCGTGAGCGGGCGCAAATGGAAAAGCTTTTTCCAAAAGGGAAGAAGCTTAGATACATCGCAGTCCGTGGCCAAGATTCAGGAAACAAGCGAAGGGACATATTTTAGTGTCATGCGCGAGCCCCGACCTCAGCGTGACACCACAGAAGGAGTGCGTCAGGCACGAAGCGCGGAAAACGTCAGTGATGTCCCTAATGATACGGGGCAGCGATCTGTTAGGGCCAGGCATGTAGGTTCAGATGTTAAGCGTAATGTGAGGGAGATACGAACTCCTGTTCACCAACCGGTCACGATATCATTTAGTCACCAACCCGTGCGGGAACGCTCGCAAACCACGGGTGAGATGCGCATTAGAAGACACCCGGTGTTGACTTCGTTCAAACGTGTATCATCCGATCAAACTGTATTTTATACGAAAGTGGAATATCATCCTACGAAGGTCAATCATCGGAGAGCGTCGACGGGCGGCGAGGAACTCGAGATCTCCGTGCGGAGACAAAAGGTTCCGAGCTCAGAGCACCGCCCGGTGTCGGTTTACGACAATCGGCCGATCTCGATATACGATAACGAGCCGACAGCGTATCGGTATTCGTCGCCGGTGTTTTCGCAGAATTACCGCGCCATACCCGAAGAGAAGCACCGCTACTCGAACCCAGTGGACATGACCACCCCTCCCCTGAAGAGATCAGCCAAGGGGAGGCTGTCGGACCAGAAGATTGCCATCACTGGAGCGAGGCTTGCGCATGCGTCTCTAGTGCCTTGCTCTAACAGCGGAAGGCCGATGCACTGAATGAGATGCCGTGCAGTTGTGACAGTCACGTGTTCTAGTTCACGGTCATGGGATAGCTATCAAGAGTCGCGTTGCACTTCTCAAGCAGTTAAATATTGTGAAGAAGATTATTTATTTTGGAATGATCGTGCTGTGATGGCTTTTGTGGAGAGCAAGTGATTTTTCACTGGTTTCTATCGTTCGGGGCAAACACAGTGAAGCTTGCAGTAAATGTTTGGACGTTTGGTAGTTTTGACATTCTATAAATATATACCGCACAAATTTGTAAGAATTCAGTCAACATTTAGAATTCCTGCCGTAGAAATACGTTGTGCTGTTCTTGTTTTCTCCAGTTGTTTAAGTCACCGTTTGGAATCTCGTATCAATCTGGGAAGCTTGCATATTTTAATGTGAAGGATTGGGGTGCACCCTGTTCACGTTATTTGTAGGCAGAACTCGCACGACAAGTACCTTTAAGAAAACACATTCGTCGAAATTCAGTGCAGTCTGTACAAAACGTTAAACTTCCAGACATTTACTGCTTTGCTTTATTTCTACCTAACCCTACCCCTCACGCTCCATTGAAAATTCCAGTGAGTTTAGTACGATGTGAACGCTTGGTGCCGCTTGTATGAAGTACTTATTCCATCAGATTGCCAGTGCTATGAACGAGGGGAAGGGAATTACCAAAAAAACCTTTGCGTTGCTTCTAGTAAAATCTGAAATAGCCAGCAACACATAGTTCATGGGAAGAATTTGTGAATTTcgaatatattttaatttatcatgaaaataatatttttaggCCTTTAAAGCGTGTTTTAATATAAATCtcaaatgtaaataattttaagagtTGGCGATAATATTATTTTCTCTAAATCGTCTCGTTGTAGAGATGGGAAGCGGGAAGTGCTCAATTGAGATGAACCCTGTTgaataggccgttttcgtattctcggtatcgaactggaactagcttgcaattgaggctaatgcgggtaaatcttttctaatgcaaatgagatgaagctgtttttaatgatattcccccgcattagcctccattgcatgctagttccagttcaaaaccgagagtacgaaactggTCTATTGCGATTTGATTTTATCTTTCCACCCAGCCTTCGTATTATTTTAGTATTTAATTTGGAACTTTTAAGGGTTGATAAGCAAGTCGTATTCAACAGGGTTGTATTTTATCATTCCTTTGATACAGTTCTTAAATtcttaagaatatttttttgaaCACTTTCTGAGGTCTTGAAGATTGCATTTTAACTCGGCTCACGGTAAATTTGAAATGTTGCACAAGGAGCTGGTTACCAAATACAAAAGTGTAGTAAGGAATGAGTCATTAAACCCCAAACGAAGGCGTGGTTTTTGTTGTGTTGTCAATTTGCATTACAGGTCCAGTTTTAAATAAGGTTCTATCAATTCCTCTGAAAAAGCCCC

Protein

Uniprot

Uniprot term	Description
Q6GPD0	Rho GTPase-activating protein 32 OS=Xenopus laevis OX=8355 GN=arhgap32 PE=2 SV=1
Q811P8	Rho GTPase-activating protein 32 OS=Mus musculus OX=10090 GN=Arhgap32 PE=1 SV=2
A7KAX9	Rho GTPase-activating protein 32 OS=Homo sapiens OX=9606 GN=ARHGAP32 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051576	Family	PX Domain-Containing Rho GAP	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15729	CDC42 GTPASE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20647	ARHGAP32; Rho GTPase-activating protein 32	-	Membrane trafficking	ko04131	deepkoala