Gene detail

Detailed information of FUN_035806-T1 in Acropora pulchra

Genomic Location: ptg000025l:11926449...11932570
NR annotation: XP_029195971.2, ribosome-recycling factor, mitochondrial-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q166F5	Ribosome-recycling factor OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=frr PE=3 SV=1
Q9X5F0	Ribosome-recycling factor OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=frr PE=3 SV=2
Q1GRQ3	Ribosome-recycling factor OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) OX=317655 GN=frr PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006473 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01765 all species →	RRF	Ribosome recycling factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036191 all species →	Homologous_superfamily	RRF superfamily	Interproscan
IPR002661 all species →	Family	Ribosome recycling factor	Interproscan
IPR023584 all species →	Domain	Ribosome recycling factor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20982 all species →	RIBOSOME RECYCLING FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0043023 all species →	Molecular Function	ribosomal large subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02838	frr, MRRF, RRF; ribosome recycling factor	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.