Detailed information of FUN_035810-T1 in Acropora pulchra

Genomic Location: ptg000025l:12020219...12036419
NR annotation: XP_044175290.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114961454 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15943Neural-cadherin OS=Drosophila melanogaster OX=7227 GN=CadN PE=1 SV=2
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q9VJB6Putative neural-cadherin 2 OS=Drosophila melanogaster OX=7227 GN=CadN2 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF01049CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000233DomainCadherin, Y-type LIR-motifInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

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