Gene detail

Detailed information of FUN_035940-T1 in Acropora pulchra

Genomic Location: ptg000025l:13475320...13478276
NR annotation: XP_029204260.2, ras-related protein ORAB-1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86JC8	Ras-related protein RabH OS=Dictyostelium discoideum OX=44689 GN=rabH PE=3 SV=1
P34729	Ras-like protein 1 OS=Physarum polycephalum OX=5791 GN=RAS1 PE=2 SV=1
P15064	Ras-like protein rasG OS=Dictyostelium discoideum OX=44689 GN=rasG PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004466 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR050209 all species →	Family	Rab GTPases family involved in membrane trafficking	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47979 all species →	DRAB11-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030100 all species →	Biological Process	regulation of endocytosis	Interproscan
GO:0055037 all species →	Cellular Component	recycling endosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_035940-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.