Detailed information of FUN_036021-T3 in Acropora pulchra

Genomic Location: ptg000025l:14567873...14589635
NR annotation: XP_029188091.2, nuclear receptor coactivator 5-like isoform X2 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HCD5Nuclear receptor coactivator 5 OS=Homo sapiens OX=9606 GN=NCOA5 PE=1 SV=2
Q91W39Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1
Q0VCY7Serine/arginine-rich splicing factor 1 OS=Bos taurus OX=9913 GN=SRSF1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003248 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR036621
all species →
Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR052600
all species →
FamilyNuclear receptor coactivator/corepressorInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23295
all species →
NUCLEAR RECEPTOR COACTIVATOR 5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_036021-T3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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