Gene detail

Detailed information of FUN_036205-T2 in Acropora pulchra

Genomic Location: ptg000025l:16499632...16512787
NR annotation: XP_029184440.2, poly [ADP-ribose] polymerase 2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_036205-T2

ATGTCGCAAACACGAGGCAGGCGACGAAAGGCACAGACAAGTTCTGAAGATCAAGATTCCACAACAAATGTACCAACAAAGAAGGCAAAAGTGGACAAAAACAAAAATTTGAATGATGCTGGAGGACAAGCCATGACATGGGAAATAGAAGAGGCTAAATCAACATGGACAACTTATTCAGATGAGCAGGTGAAGCTGATTACAGAAGCCTTTAAAAGTGAGAAGGCAGATGTTGATATCACTGATGGGAAAGTCGAATTTACCATTTTATTTGAGCGCATGGTGCAAAGGAACAAGAAAAGCGGATGGGAGAGGAGAATTCGATGTATGTCAACTGATGGAAATTCAGACACTGTTGAATATACCTGGGAATGGGAAGATGCCAAAGGAAACTGGACAGAATATTCTAAACCCACTGTGAGCCTTTTGGAGGCAGCATCTTTGTGTGGTTTAGCCAGTGTAAAAATAAAAGAGAACAAAAAAGACCTTATTGTAGATTTGACAAAAAATGTGCAGACAACAAAAACTAAACGAGGATCCAAGAATGTGCGCAGGGTAAAAGTCAGTGATACCGATGCTTCAAAACTTCCAACTAAAGCAAAAACTTCCAGTTCAGACACTGCAGTTGTAAAGAAAGAAAACAAGGTGAAAAAAGAAAAGGCTTCTACTGATGAAGAAAGTGAAAAAGGTGAAGTGAAGTCAGTGGTTTTCAGTGGCAAGGCTCCAGTGGACTCTCACTGCACCATTAAAGATAAAACTCATGTGTTTACAGAGGGTAATGACATTTGGGATGTGATGCTCAATCAGACCAATGTTATGAACAATAACAACAAATACTACCTGATTCAGCTGTTAGAGGACAACAATGCCAAGAAGTATTATGTTTGGCAAAGATGGGGACGAGTTGGATTCGATGGACAAAATAACTTGATAAACTGTGGTCCAGATCTTCAAGCAGCTAAAAAAGGCTTTACAAAAAAATTCTCAGATAAGACAAAGAATTCCTGGGAAGATAGACACAATTTTGAGAAGGTTCCAGGGAAATATGATCTCCTCATCATGGATTATAATGCAGAGAAAGAGGAGGCTGATGCAGTTGATGCATGCCCTGTTAAAGAAGAAAAAACACAGATTGACAGCAAGCTAGACAAGAGAGTTCAAAACTTAGTAGAACTGATATGCAATATTCAGGCCATGGAAGAAATTCTGAAAGAAATGAAATATGACACCAAGAAAGCACCATTAGGAAAGCTCACCACAGATCAGATCAAGGCTGGTTATGAAGCATTGAAAAAAATTGACAGCTGCATCACAAACAATGACTTTGGATCCAGTCTTGTAAAAGCATGCGATGAGTTTTATACAAGGATTCCTCACTCTTTTGGAATGAAGAGACCACCTCTAATAAGAACGACAGAAGAAGTGAAGATCAAATTGAATTTGCTAGAGGCATTAGGAGATATACAGATTGCCATCAAAGCCCTACATGAAGAAGAAGAATCCCTTGAGCATCCAATTGATAAACATTATAAAACACTAAATTGCTCTCTCACGCCGCTTGATCATGAAAGCGATGACTTCAAAGTGATTGCTAAATATTTGGAGAACACCCATGCTGAAACTCATAATCAGTACCACATGGAATTACTGGATGTGTTTGAATTAGATCGGGGAAAGAAATCCTTCACCGATGTTGGCAACAGAATGCTCCTGTGGCACGGATCGCGTTTGACAAACTGGGTGGGCATCTTAAGTCAAGGATTGAGGATAGCTCCTCCGGAGGCTCCAGTGACTGGCTACATGTTTGGCAAAGGTGTCTACTTCGCAGACATGTCATCCAAAAGCGCAAACTACTGCTTTGCGACAAAGTCAAAGAATGTTGGTTTGCTTGTTCTCAGTGAGGTTTCTCTTGGCAAGTGTAATGAACTTCTCTCTGCAGACTACAGCGCAGACAAGCTTCCTTCAGATTGTCACAGTGTCAAAGGCATGGGAAAAATAGCCCCCGATCCAAGCGAGACCTTCACGATGCCGGATGGGGTTGTTGTTCCCTTTGGTAAAAGCTCAGAAACTGGTGTGATCAACCCACGTGGTTACACGCTCAACTATAACGAATACATCGTCTACAACACAAACCAGGTTATTTTGATTCTTTCCTTGGGTTATTTGTTTCGTGATCTAGCAATTGCACAGCTTAGGAACTTCATATTGACGATTAATATCACTTGTATCGCTACGCGACTTGAGCAATTTCAGCAACTTCTGAACACTTGCGTAATATTAATCCTTAAGTTTACTCGCCCCCATGCGATTACCTATACAAACGTTTTTTACTTTCACTTTATCAATTCTGGGTTTGAAAAAACAAAAACAAAAAACCTTTGA

Transcript

FUN_036205-T2

GACGAAAAACGATAGTTTGGCGGATGATCCCGTCAGAGACTTAAAAAATGCGTTTCCTATGCAATTGGTAGATCGCCCAAATTACGGACCACTTGCAGTCTATAGAGGGGGTTGAATTTTACAGGTTACTAAAATGGATATGGACTCAAAATATTTCAAAACAAGATTAACGTGTATGAAAGGTAGGCACTATAGGGAAGCAACGGAAAAGATCCGCATTGAAAGAGTCCGATCCACTTTTATTTTCTCCCAAGCATTTCTTTTGGATGGTGAGACTGGTACCAATAATATCGGGGCCAATTTCCCGCGCGGATTTGAGCATGAATCATAATTTAGTCCTCCATTGTTGTTTGTCTGACAGGTAGGGGAGAAATTTTGAAAGCCATCTGAAATGTCGCAAACACGAGGCAGGCGACGAAAGGCACAGACAAGTTCTGAAGATCAAGATTCCACAACAAATGTACCAACAAAGAAGGCAAAAGTGGACAAAAACAAAAATTTGAATGATGCTGGAGGACAAGCCATGACATGGGAAATAGAAGAGGCTAAATCAACATGGACAACTTATTCAGATGAGCAGGTGAAGCTGATTACAGAAGCCTTTAAAAGTGAGAAGGCAGATGTTGATATCACTGATGGGAAAGTCGAATTTACCATTTTATTTGAGCGCATGGTGCAAAGGAACAAGAAAAGCGGATGGGAGAGGAGAATTCGATGTATGTCAACTGATGGAAATTCAGACACTGTTGAATATACCTGGGAATGGGAAGATGCCAAAGGAAACTGGACAGAATATTCTAAACCCACTGTGAGCCTTTTGGAGGCAGCATCTTTGTGTGGTTTAGCCAGTGTAAAAATAAAAGAGAACAAAAAAGACCTTATTGTAGATTTGACAAAAAATGTGCAGACAACAAAAACTAAACGAGGATCCAAGAATGTGCGCAGGGTAAAAGTCAGTGATACCGATGCTTCAAAACTTCCAACTAAAGCAAAAACTTCCAGTTCAGACACTGCAGTTGTAAAGAAAGAAAACAAGGTGAAAAAAGAAAAGGCTTCTACTGATGAAGAAAGTGAAAAAGGTGAAGTGAAGTCAGTGGTTTTCAGTGGCAAGGCTCCAGTGGACTCTCACTGCACCATTAAAGATAAAACTCATGTGTTTACAGAGGGTAATGACATTTGGGATGTGATGCTCAATCAGACCAATGTTATGAACAATAACAACAAATACTACCTGATTCAGCTGTTAGAGGACAACAATGCCAAGAAGTATTATGTTTGGCAAAGATGGGGACGAGTTGGATTCGATGGACAAAATAACTTGATAAACTGTGGTCCAGATCTTCAAGCAGCTAAAAAAGGCTTTACAAAAAAATTCTCAGATAAGACAAAGAATTCCTGGGAAGATAGACACAATTTTGAGAAGGTTCCAGGGAAATATGATCTCCTCATCATGGATTATAATGCAGAGAAAGAGGAGGCTGATGCAGTTGATGCATGCCCTGTTAAAGAAGAAAAAACACAGATTGACAGCAAGCTAGACAAGAGAGTTCAAAACTTAGTAGAACTGATATGCAATATTCAGGCCATGGAAGAAATTCTGAAAGAAATGAAATATGACACCAAGAAAGCACCATTAGGAAAGCTCACCACAGATCAGATCAAGGCTGGTTATGAAGCATTGAAAAAAATTGACAGCTGCATCACAAACAATGACTTTGGATCCAGTCTTGTAAAAGCATGCGATGAGTTTTATACAAGGATTCCTCACTCTTTTGGAATGAAGAGACCACCTCTAATAAGAACGACAGAAGAAGTGAAGATCAAATTGAATTTGCTAGAGGCATTAGGAGATATACAGATTGCCATCAAAGCCCTACATGAAGAAGAAGAATCCCTTGAGCATCCAATTGATAAACATTATAAAACACTAAATTGCTCTCTCACGCCGCTTGATCATGAAAGCGATGACTTCAAAGTGATTGCTAAATATTTGGAGAACACCCATGCTGAAACTCATAATCAGTACCACATGGAATTACTGGATGTGTTTGAATTAGATCGGGGAAAGAAATCCTTCACCGATGTTGGCAACAGAATGCTCCTGTGGCACGGATCGCGTTTGACAAACTGGGTGGGCATCTTAAGTCAAGGATTGAGGATAGCTCCTCCGGAGGCTCCAGTGACTGGCTACATGTTTGGCAAAGGTGTCTACTTCGCAGACATGTCATCCAAAAGCGCAAACTACTGCTTTGCGACAAAGTCAAAGAATGTTGGTTTGCTTGTTCTCAGTGAGGTTTCTCTTGGCAAGTGTAATGAACTTCTCTCTGCAGACTACAGCGCAGACAAGCTTCCTTCAGATTGTCACAGTGTCAAAGGCATGGGAAAAATAGCCCCCGATCCAAGCGAGACCTTCACGATGCCGGATGGGGTTGTTGTTCCCTTTGGTAAAAGCTCAGAAACTGGTGTGATCAACCCACGTGGTTACACGCTCAACTATAACGAATACATCGTCTACAACACAAACCAGGTTATTTTGATTCTTTCCTTGGGTTATTTGTTTCGTGATCTAGCAATTGCACAGCTTAGGAACTTCATATTGACGATTAATATCACTTGTATCGCTACGCGACTTGAGCAATTTCAGCAACTTCTGAACACTTGCGTAATATTAATCCTTAAGTTTACTCGCCCCCATGCGATTACCTATACAAACGTTTTTTACTTTCACTTTATCAATTCTGGGTTTGAAAAAACAAAAACAAAAAACCTTTGATTCATCAGCGGCACATAAGTGATGTTACGTGTTAAGCCAGCACTGTTATCTATGATTTATGAAGTGGTCATGCTTATTGTGTCGACATGGATGGCAACCTAATGCTTTTGAGCTAAGTTTGAGCACGCTTTGTCTTCCAGGTGCGAATGAGGTTCTTGGTGAAAGTGAAGTTTAATTTCAAGTACTGAATTCCTCTAACCACTCAACAGAGCGCTGCACTCCATCTCCATGACCTCATGAAAGATGATTTGAAACAAAAACGAACCGTTTCACAATTTGATTTCAGTACTGTATAGCTGCACACGGGAAGGCAAACACAGTTGTATTATTCCATAGCCATGTGAGCTAAGATGCAAAACTCGGTTTTCGTACTAGGTTAAAAAGGTGTTTTATCGTTTCGTTTGACTGAACGGAAGGACGAAATTCCTCCGCAAAGTAAGTAGCAAGGTATCATTTGCTCTTTTTGTAATCCGTTCGAGTGGAGGATTTTATAGGTTCATATTTTTTCTGCTCTCGCCGTCTTTCAGTTATGCACCTGACATTTTGAGCTTTAAACGCATTAAAACTTTGGTTTCATTCGTTTGTTTTGTTTTATTTTTTTTTTGCAACGGAAACCTATCGGGGAGGGGACAGGTTATTTTTGCAGTGGAAGACCGACAAGTTCGTAGCAATAAATGAAAAGCCAAGATCATTGTGCTTCTGAGGGGCTGCTAAGATGTTATGATTGGCCGACTTCTTTTGTCATTTTGATCTTGTTGCGCGATGTATTTTTTATTGCAGCTGGGGTTACTTCCTTGGTTCTTTCCCCGAACGCCATACTGAAATTGCACAACCCGACACTCCTGTTCTGTTATAATTTTCTGTTGGTCCCACC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O88554	Poly [ADP-ribose] polymerase 2 OS=Mus musculus OX=10090 GN=Parp2 PE=1 SV=3
Q9UGN5	Poly [ADP-ribose] polymerase 2 OS=Homo sapiens OX=9606 GN=PARP2 PE=1 SV=2
Q11207	Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=PARP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001433 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05406 all species →	WGR	WGR domain	Domain	Interproscan
PF02825 all species →	WWE	WWE domain	Family	Interproscan
PF02877 all species →	PARP_reg	Poly(ADP-ribose) polymerase, regulatory domain	Domain	Interproscan
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037197 all species →	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR018123 all species →	Domain	WWE domain, subgroup	Interproscan
IPR008893 all species →	Domain	WGR domain	Interproscan
IPR004170 all species →	Domain	WWE domain	Interproscan
IPR050800 all species →	Family	ADP-ribosyltransferase diphtheria toxin-like	Interproscan
IPR004102 all species →	Domain	Poly(ADP-ribose) polymerase, regulatory domain	Interproscan
IPR036616 all species →	Homologous_superfamily	Poly(ADP-ribose) polymerase, regulatory domain superfamily	Interproscan
IPR036930 all species →	Homologous_superfamily	WGR domain superfamily	Interproscan
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10459 all species →	DNA LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0070212 all species →	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_036205-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.