Detailed information of FUN_036220-T1 in Dendrogyra cylindrus

Genomic Location: contig_136:199922...217199
NR annotation: XP_020625933.1, sorting nexin-27-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UHD6Sorting nexin-27 OS=Mus musculus OX=10090 GN=Snx27 PE=1 SV=2
Q8K4V4Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2
A5PKA5Sorting nexin-27 OS=Bos taurus OX=9913 GN=SNX27 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00788RARas association (RalGDS/AF-6) domainDomainInterproscan
PF18116SNX17_FERM_CSorting Nexin 17 FERM C-terminal domainDomainInterproscan
PF21271SNX17-31_F2_FERMSortin nexin 17/31, FERM domain, F2 lobeDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00787PXPX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037827DomainSNX27, atypical FERM-like domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR000159DomainRas-associating domainInterproscan
IPR040842DomainSorting nexin-17/31, FERM domainInterproscan
IPR048767DomainSortin nexin 17/31, FERM domain, F2 lobeInterproscan
IPR037833DomainSNX27, PX domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR037831FamilySNX17/27/31-likeInterproscan
IPR001683DomainPhox homologyInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12431SORTING NEXIN 17 AND 27Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:1990126Biological Processendocytic recyclingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17936SNX27; sorting nexin-27-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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