Detailed information of FUN_036475-T1 in Dendrogyra cylindrus

Genomic Location: contig_140:633304...634314
NR annotation: WP_047048781.1, flagellin [Vibrio mexicanus]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q56572Flagellin B OS=Vibrio anguillarum OX=55601 GN=flaB PE=1 SV=3
Q56703Polar flagellin A OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=flaA PE=3 SV=1
A5F6C4Flagellin B OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=flaB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013562 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00700
all species →		Flagellin_CBacterial flagellin C-terminal helical regionFamilyInterproscan
PF00669
all species →		Flagellin_NBacterial flagellin N-terminal helical regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042187
all species →		Homologous_superfamilyFlagellin, C-terminal domain, subdomain 2Interproscan
IPR001029
all species →		DomainFlagellin, N-terminal domainInterproscan
IPR046358
all species →		DomainFlagellin, C-terminal domainInterproscan
IPR001492
all species →		FamilyFlagellinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42792
all species →		FLAGELLINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009288
all species →		Cellular Componentbacterial-type flagellumInterproscan
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_036475-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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