Gene detail

Detailed information of FUN_037043-T1 in Acropora pulchra

Genomic Location: ptg000026l:4945434...4950277
NR annotation: XP_015778162.1, PREDICTED: uncharacterized protein LOC107356045 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_037043-T1

AATACAATCCCTAATTGTTTTGGTCAGCTTCGTGGAAAGCTTTTATCCCAGTGGGACTGTTCGTTATGGTTTCCCCGATATTTGCTTTACCAGGAAAGAGCCGCTACATGTGCGTACTTTAGCTATTAACGAAGTACATACAACTACAGTATTGTGTAGAGACAGAAATACTCTGATATTTAATGATGAACAGCAACCAAAAGGGGAACGCGTTTGCCGGGGTGGACAGAGATGGTGTGGCTCAACACAAAAACACCATGCAAGAGTTAGCGATGAAAAAACAAATAACAATGTACCAAAGAGAAGAGAAAATTCTTGAAAGAGAGCTTCGAGAGATTTCTAAAGTGAAAGAAACACTCCTGCAAATACGAATGCCGTTAAGAAGGAGGGTAAAAGAAGCAGAATTCGAAGAACAAAACAACGGAGGAGGAAGATCAGAAGAATCGTTGAGGAAGGCGACCTCCGCTGTCGCTAGAAGCAGCACTATAACACGGCCAGCGAGCAACCCACAGTTTGCGGAAAAAGGCGACGAAAGTAACATTGACTTGTTAAAGAGCAAACCGGAATTGTCAACAACTACAGAAGGTAACAGCATTTCAGCTCTGAGTTCTAAGGAAATTAGAGGACATAAAACCATTCAGATCGCACGTCCAAGAAAAACTCCGAAAGTGGAACAAACAAAATATTTAGCCCCGGTATTTCCAGACGTTAAAAGACCGGCTTCTGAAGGCAGCAATAAATATGAAAGTCTACCACCTATTAATGAAATTAGCCTTCCGCGGCCGCGGGCAACATGTACTCCATCGGTTCGACGAAAATCACGACTAAGGAATAAACCAACTAGTGAGATAAAATACCCGGAGAAACAATGTGAAAGCCGGAGCGTAAGTTCGTCTAGAGCGTATGCGTCAGTTTTGTTAGATCGAAATGACGCAGACACGAGCAAGGATTATTGCAGAGCAAAATCAGTTCCATGCGCGCATCCGGCGGCTTCACATGGACTTCAAAATCGAGCTGGATCACAGAGGCGAACAGAAACAGATGAAGCTACAACGCTAACAATGGAAGAGACACTACGGATTAAAGGCAAATTTCGTCAAATTGGGCACTCGGTCATCGCGACGGCATTACTTAAAGGATTAAGGCAGAAAAAACAACTTTCTTCTGAGGCAATTCATAACATGCACAAACCGATATCTTTAGGGGAGGAAACTGTGAAAAATGACTTCAACAACAATACTGATAGTGGAGCTTCGTCTTATGAAACAAAAGAAGAATCACCTGATCAAAATAATAATAAAAAAACGTTTAAAAGAATTGCGCAAAAAGCAATTAATGTAAATAGACTTTTGAATGCAACCAAAGACAGGAGACGATCGCTGTCCTATCGCGGTGGTGACCCTGTTTTAAACTCCATTGTTACACGACCAAGTGCTCTTGGTGTCAAACAAGAAAACTCAATGCCTAGTTCCACACGAAGGAAAAAGTGCTGGGCGGGAAAAGGGAATGGAGCGACGCAAAGAAAAGAGAACCAGAGTATTCAAAGAATGCATTCGAACATTCTCGATCGCAGACATGTATGTATCAGCAAAGGCCACTCGTCTTTGATATCTGCGGTAACGCCATTGAGTCTTGAAATTCGTGTGAAAGGTTCTGCTTTGGGGTGTATTTCACGTTTGTGCCCCACGTGCTCACAAAATGATCTTCAAAGGGAATTCAACGAAGCGCCAATTGTGTTTCGCGCCAAAATTTTATCGGGGCCAAGGCAAGAGGTTATAAAGCAAGATAGAGAACAAATCAGCTTCTACGACCCGAATGACGTTTACATGTTGAAGATTGATAAAATATTCAAAGGTGAAGCCAATGTGACTGAGCTGCCTGGAATCAAGTTCCTTGGGCTTCGTCGCGAGAGCATAGCGATGGACTTTCACACTCCAGGACAATGGTGGGAAATGTGTCTCCCTTCCTTGAAAGCTCTAAAACACGGTCGTGAGTACCTGCTGTCTGGTTCAATCCAGAAGAGCACACTTCGGTCGTCGTTTTGTGACATGCGTTACAGCTGGTCAAGTGTCACATATGAAGAAAGAAGGGCGCTAAACAGGGAGCACAGAAATGCCAGCGTGACTTTGCGATAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011397 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00965 all species →	TIMP	Tissue inhibitor of metalloproteinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001820 all species →	Family	Protease inhibitor I35 (TIMP)	Interproscan
IPR008993 all species →	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11844 all species →	METALLOPROTEASE INHIBITOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002020 all species →	Molecular Function	protease binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008191 all species →	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0010033 all species →	Biological Process	obsolete response to organic substance	Interproscan
GO:0010951 all species →	Biological Process	negative regulation of endopeptidase activity	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0051045 all species →	Biological Process	negative regulation of membrane protein ectodomain proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_037043-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.