Detailed information of FUN_037062-T2 in Acropora pulchra

Genomic Location: ptg000026l:5139873...5163343
NR annotation: XP_029187728.2, LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 4-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O95628CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3
Q8BT14CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2
Q09818Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003643 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_037062-T2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR039780
all species →		FamilyCCR4-NOT transcription complex subunit 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12603
all species →		CCR4-NOT TRANSCRIPTION COMPLEX RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0030014
all species →		Cellular ComponentCCR4-NOT complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_037062-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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