Detailed information of FUN_037063-T1 in Acropora pulchra

Genomic Location: ptg000026l:5163931...5175582
NR annotation: XP_029187675.2, DNA-binding protein RFX6-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RJA1DNA-binding protein RFX6 OS=Danio rerio OX=7955 GN=rfx6 PE=2 SV=2
D2HNW6DNA-binding protein RFX6 OS=Ailuropoda melanoleuca OX=9646 GN=RFX6 PE=3 SV=2
Q8HWS3DNA-binding protein RFX6 OS=Homo sapiens OX=9606 GN=RFX6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000698 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_037063-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039779
all species →		FamilyRFX-like DNA-binding proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12619
all species →		RFX TRANSCRIPTION FACTOR FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_037063-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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