Gene detail

Detailed information of FUN_037353-T1 in Acropora pulchra

Genomic Location: ptg000026l:9247095...9259576
NR annotation: XP_044175445.1, guanylate-binding protein 6-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_037353-T1

AATAAGCTTTATTGTCCATATTTCTGGGAAGACATTTATTAAAATCGACATGCATTTAATTTAGTGCAATCCAGGACATATCCGGATTCAGACTTGATCCGGACTAACCTCCTGAACTATGGAACAAGCTTCGGAACATGATTCCTATTTGGATTTGAATGTAAGAGGAGAAAACGGTAAAATCTATTTTAGATTCAAAGATCAGGTTTTGTATTTTCTCAAAAAAGTGCACTCAAAGTGAATCTAAGACTGTCTCCTACCTAACCCTCCCCTCAATTGGTTTTTTTGTATAACCAGGACTCAGCTCTACAAGTTTAAAGTAGCCTTACCTTGACGAATTTTTATATTTATTGCGAATCTGTCACAGCGCATCAAACTTAGCGCGAGCAACGAAGGACAGCCGAGACAGAGTGTGGCAGCTTGCCAAGACGACACTGAATATTTCCACAAAACCTTTCCGTTCTTTATTTGGCTTCTGAGGGATGTGACCCTGAAACTACCGTCTGATTGTAAAGACATCAAAGATTACTTCTTCAAACGGGTTTTCCAGGATCCAGAAGGGTCCAACGATGGCTCAGTTCAAAAAGTTGCAGAAAGCATCCTACGTTTCTTTTCTGGATTTGAAGCGTTCAAACTTCCTCCACCATCGGCTGATCTTGAAGAAATGAGAAATATGGCAAAGGATAAAGGCGAACCAACTCCCGCTTTTCTGAGCGGAGTAGAAAAATTCAAGCCATTGTTAAAGTCTGTCTTGGTACCCAAACAAAGCGTTAACGCTGGCGACATTGTGACCGGTGAAGGCCTTGCAGAATTGGTCTTTCGCTATACTGAAGCCATCAATACCCCGGGTATGATTCCTAACGTGCAAACTGCTTGGGAAAATTTTGTAAAGACGAAGTGTTCGGAGGCTCGCGAAGCGTCATTTCGGCTGTATGAAGAAACGATAACAGCGGAACTGTCGGGGAAACTGCCTTGTGATCATGACGTCATCAGACAGAAGCATGAAATGGCTCTTCAAAAAGGATTTGCTTTTTTTGAGGATGAAACTTTTGGAATTGCTGCTACCACAACAGAAAAGTACCGGAGAGAAATGATGACATCTTGTGATAAAGTCTTACAATCCAGGCAACTTGAAAATGAAACTTCTACCCGTCAAGCTTGTGATGCTCTTCTAAAGGATTTGAAAAAGGAATACCTGGATCCTGTTCTTGACCAACTACTTGGACAGGGAGGTGCCGAAGTATCGTTTGATGACATCCTCCAGGGATATGAAAGGATAAAACAAGGCTTTGATACTCGTGCCACAGGAGCGAAAGACGTCTGTGCTGCAATGTTCTTTGACTTTCATCCGATGCTAATGAAAGAGATGCAGGGAAATTTAAAACTTCTGAAACAGCTAAAAGATTTCAACAAAAGAAAGAGTCAAGAAATTGCAGCCCTTGCTTATCAAAAGCAGGAACATATGAGGCTTCAGGAACAACACGCCCAGCTCTTACAAGAAATTCGTAAACGGAAGCTGGAAATGGAAAAGCAAGAAAGAAAATTCAGTAAGGAAAAGGAAATACTTCAACAAAAAATGGCAGCAGATGCGAAAGCTCAGCAAGAACAGACGACAAACATGATTAAGGCAAGCATGCAGAAAGCTGAACAAGATCGTAGAGCCATGATGCAAGCGAATCAAGCAACGAAAGCACGCTTTGAAGAAATGGAGAATTATAAACAAGAAATAAAGCAGGAGAATGCCGAATTGATTGATCTTCTGAACGAATGCAAGAAGAAGATCGACGAATTGAGCGAACCATGGTTCTTTGAAAAGGCTCTCAAGAAGGTGGGCGACACTCTCAAGTCAACCTGGGACAAATGTATTAATATGTAAACCGATTGGTGTAACTCGTAGCGTTTCTCTTATTAAAACAGCAAATTCATGATCGCTTCATAGGTATTGACGTAGCGTTCGTTGTGTCTCTTCCCTAGCCTCCGTAGAAATAG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000346 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02841 all species →	GBP_C	Guanylate-binding protein, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003191 all species →	Domain	Guanylate-binding protein/Atlastin, C-terminal	Interproscan
IPR036543 all species →	Homologous_superfamily	Guanylate-binding protein, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751 all species →	GUANYLATE BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_037353-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.