Gene detail

Detailed information of FUN_037383-T1 in Siderastrea siderea

Genomic Location: contig_43:3887336...3896141
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_037383-T1

ATGTCTCTTGTTTATGGTCCTTTTGCGTCCCTTCTTGGTCTTTTTCTGCAGCTTCATCTTGTAGTCATTGTTATATCTCTTTTAGGCGATACTTTGGATGCGAAAGAGACGTATATTTGTAAATGTGAAGATTTTCCTATAGAAGACCGACCGTTTGTGGCGATATGGAACGCCCCGACTGGTGGCTGTTCTGTAAACTACAGCATCAACATAAACTTGAGAGACTTTGATATCTTGGAGAATCCGAAGCAAACTTGGAATGGAAAATATGTTACTGTGTTTTATAATGCTCAGTTGGGGTTATATCCGTATTTTACGAACGCGGAGGGAACAAATTCGTATAACGGCGGAATGCCCCAGCTGATAGACTTAGCTGCACACCTCAATAAAATGAAGAAagacataataaaaaaaattccagaCCCACACTTTAGTGGGCTGGCAGTAATTGACTGGGAAGGCTGGCGACCAACTTGGGAGAGAAACTTTGATTCTAAACGAATTTACCAGAGCAGATCAGTTGATATCGTTCAAGAAAAGCACCCTGAATGGTCAATGGAAGAACAAATTGAGGAGGCAAAAAAAGAGTTTGAACGATCTGCCCGAATATTCATGGAAAGCTCTATTACGTTAGCAAGACGTCTGAGACCCAGAGGGGTATGGGGCTTCTATGGGTTCCCAGACTGTTTTGGAAGCAATGAAACAAATTATCAGTGCTCTGATGAGCACAAGCAGATGAACAACAACCTAAAATGGTTGTTTTCAAGCAGTACAGCACTTTACCCATCTATTTACCTGTACGATCAGCAGCCTTGGAATAAAGCATATACACATGGGAGATTAGAAGAGTCATTCAGACTGGCAAGTTTGGTTTCAAGAGAAACAAAGAGAACATTGCCAGTTTTTCCTTATTTCCGACATTTGTATGAAGGCAAGCCACTGGAGTTTGATTATCTCACTGATATTGATCTCCATAATACTATTGGCCAGGCAGCTGATATGGGTGCAGCAGGTGTGGTCATGTGGGGGAACAGGCGCGATGAAAACACCTCCCCTAAAGTGTGCCGAGAACTTAATGACTACATCAAGACAAAGCTAGGGCCATACTTTGAGTCTGTGAGGGACAGGCTGGAGACTTGCAGTGAGAGGAAATGTAATGGACATGGACGATGTGTGGatagaaaattaatttcatcaAAATGGATGAATGATGAGCCACATTTCTATGGTCAAACGTGCCATGGATCAGCAAGAACATTTGCTCCTTATATAAGGCAACGTGTCAGTCTCCTCGCACAAGCAGATCGACATGGAAAGAATTATAAATCTCAGCAACAGGATAACATTCACAAAACATCATCTACCATTAAACCACATCAAAAACATGGACTGACTTCCAAACAAAGGCAATTCTTGATAAAAGAACTTTCATTGCTTAATGCCACTGGACGGTATTCCAAGAAGATGTTCCTCAAATCTCATCATAAAAACTCTTCAAAAGACTTTGTGGTGTTCATGTCTACCTCTGATTCAGCTGTAGAGGTGAACAAGGCCCCTCAAGAGCACAAGGATTTTACTGAGGGAGGGGTGGTAGCAACCAGCGGGCTGCATTATCATGACCAGTACACTGAAAGCCCCAGTTTTCCCCAGACAGCAGTCAAGGGAGCCGTGGCACCAAACAAGTTAATCCTCTGTAATGGATCTACATCAGGGTCCTCGGATTGTGAGATCATGAAAGAAAGTCCGGCGACATTCTCGCGTGGATTTCACTTCCCGCACACGTACGTGGTGTTCCTGTGCGTGTCCCTTGGCTCTGCTCTTCTTGTGTCCTCAGCTTTTATCATGAGTTATTATTACTGGAATGTTCGCAAGAAagtaaaagaagaagaagaggataTCCCTAGTGGAGACTGATCAACTACTTTGAGAACATGAAATACTCAAACAAAGAAGAGATTCAAATAAAAGCACATAGAGCTTAAAATGAAGCTTGGAGGGACATACGTCTGACAAGTTACCGCTGTGATtgggcaaaacaaaaatatggTCGGACATCACATTTCTTGAAGATTATTTTATTTACCATGCAAATGTGCTCCTGGTAGTAACAATGGAGTTACACTACTTCCCAATTCTACAATTTATGGTAACAATGTCAGTACATTGCACAATATTTAACATGTTTTCAAGGTAGACATTTTATTCATCTGCAATTGATAGTTATTTGTCTGAAAAACATTTGGTGTCAGTACAAGTTTCTGGGAAACtcccccacctacccctcccctaaccgaacattttgctctaagtcataataagtaaaaaatgttgggttaggggaggggtgggtgggaCGACACACGTCCAGCGCAATAGGGATTCCGTCACATGTATGCAAATTGTAGTCGGACACTTTCTGACCGACTGGCGGACTGATACTTGCAACTAATACTGAGAATGTGCAACTGTAGGTATCACTGCAAAAACTGTAAGTGCCGCAAGTTCTGGCCTGTTAAGATCAGGAATGGCAAAGTATTTGGAAGTTTGCTAGTTCGGAGCCATAGCAGTCTCGTAAGGCAACAGGTTTCTGATAGCTCTGGGTAAACCGTAAAAAGAGAAAGGCGTAAGTAACGTGAACTCAGTTCCCATGTTACTTACGCCTGAAGCTGAGCTTCTGTGCTCCATAGGGAACGTGAATCACAATGGCAttctctttttgtttgtttgaaactGAGGTCAAAACACTTGCGAGGTGAACCGCAATGTAAAATGTTGAGCGAAAGATTACGTGGTAGAGCAATCTAGATCAACGCTACCTCTTTTAATTAAGCAGTCAGGAGAAGACTGACCCAACGAAACTCGGACTGGGTGCGTTTTTCCGCACTTGGATCCACTTGCTTGTTTTTCGTGCTTGAGACCGGTTACATGGTTTCCGGCGCTTCCACTGGTtgtgtgttttttcttttctcggcGTTTGCATTGTTTTCCGTACTTGGCGCCGTTTTTTGCATGTTTTTCTGCGCCTGACAGTGGTTGCCCATTTTGCGTGCTTAGCACCGTTTGCTTGTAGTGTTTTGGGTCACTTGGCACAGTTTGCGCGTTTTTTCTGCGCTTGGTACTTGCTCCCGCGCCTGACACCGGTTGCCTATTTTCGCGTGCTTAACCCCTTCAggcccaatagtgacaagcatctaaattctccttacagtatcatgACTTGATCAAACATGTAGGTCATGAAAATTGAGGAAATAATcactaaagatgaggtgtcttaatgtgtaagcaaattctcccaactagtaccataagaaatatctggacaacagtgaggagaagatgcatgttgatactggggcttaaaggcttaacACCGCTTGGTTTTGCGCCCGTGACACGGGCTTGGGTGTTGTCCCGCACTTGACACTATTTGCCTGATCTCGCGTGCTTAGCTCCgtttaaaaatgcatattctccttactgttctccacacatttcttatgaaactaggaaggagaatttgtctaattATCAACACACCTCATCCTTGGCGATCACTTTCtgtattctcatcacttgaatgtttgaacaagtattgataatgtaaagagaaatttcatttttgtcactgttagggtttaaagggttaatacgTTGCCTGTTTTCACGTACTTGGAACCGGTTGTGTGTCACAACTTGTAGTTCTGACTGGTTCGAGGTTTACAGTTTATTGTGTCTGTTGTAACTTGCCAGATCTCATtactttgttttggttttatggCGGTTTCATATTTAGAAAACCTCCCTGTAGCGTCTCAAAATCATTGTGGGTTGGATTTGAAGGACTGTCTGTTAGAGTTAATACTCCTTAtctcactttttttttaatcaggaAGTATTGACAACCGGTATTTTGTAACAAAAGTTATTAAAAGTCTGCTCAGTGTTAAATAAACGCTTCCTGTTACAGAAATATCAGCGACATCGATAGACTCCTTGGTATATATTGAGGTAGCTTTGTACACAGAGGAGACGTGCAAAGTTACCTAAATACCTCACTCTCTGTTTCTCGTTGTAgattctttatttaaacacgatcaGTAATTAAAGCAATTTTAAAACATGCTTCAGGGGTCGTGTACTAGACtataataaaaagaagaaaatacaTCACAGTCTTAATATTAACTAAGATTAATAAAATAAGAGAGTTGAAGGGATAATAAACACTAACAACGTACATGaaattcaaaaaataaatttaaaatgtaaAATCGGACATCTTGTTTTGGAACAATCCCCTCACTTGCCTAGGCGGTGAATAGATTAACGGGATCGTGGGTTTTGTAAGAGAAGCTGTTTCATGGATCCTGCAATTTCAGTGGATTATGGATTTAAAAATTTAATCAACTTGATTAGAGCTTTTTTGTGAAAATGTAAAAGGCTCTTGGCATGCCTACACtcagttttttgaaaaaaatcgtaAAGAGTTTGTTTGTACAAGTGGGTCTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01630 all species →	Glyco_hydro_56	Hyaluronidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR018155 all species →	Family	Hyaluronidase	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11769 all species →	HYALURONIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004415 all species →	Molecular Function	hyalurononglucosaminidase activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030214 all species →	Biological Process	hyaluronan catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01197	hya; hyaluronoglucosaminidase	EC:3.2.1.35	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.