Gene detail

Detailed information of FUN_037417-T1 in Acropora pulchra

Genomic Location: ptg000026l:10074568...10089505
NR annotation: XP_044174790.1, kinesin-II 95 kDa subunit-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_037417-T1

AGGGCACAGCAACACCAGCACTTACTCGGCATCTAATACGAGATCCTCTTCATCTTGCAAAGCTGCATCCAAAGGAGCTTGTACACCAGGAACCACTGTAGGCCCCTTGTAATCTTTGGTCATCTTGTTTGGCTGGTACCCAGGTCCTTTTCATCTGTGCATAGCTTTGTGGTCTTAGCTAAGTCCTCAGCTTTGTTTTCACCTGTTAGGTGTCCGGATCACTGTTAACAGCTTGTATCAGTAATTTTTTGGCTAACAAGAATTTTTCTCTCTTGGCTGTGTGTTCCAGTTCAAAGCAGATTGAGCTTTATGATGAAACATTCAGGCAGTTGGTGGATTCTGTTCTTGAAGGCTACAATGGTAAGCTGATATCTCTGTGAAATTTATCATTTTTACATCAAAACAACTGAGTACTAATTAAGCATTTTCTTTGTAGCCTTGTGCTATTTCTCAAGTGAAACCATCTGCAATGCATTAGCTTCACAGGGACACTTACATACATGTAGTCACTGAATCTTGAATCACTTGAAAATACTCTGCAGTATATTACAGTCGAGCAAATCTTGATATTGGATTAATTTGTGCCCAAGCTCAGTGAATGAATTTTTGTTCTGTCAAGGCCAGGTGGTTAAAATTATGACTGTCCCGTTGATTCATGACAATGATGCGTTTTTGTTGTTTTTTTTTTTCATTACTAGGTACAATATTTGCTTATGGCCAAACAGGGACAGGAAAAACATTTACCATGGAAGGTATGACATAATAGAATGACAGAGAGGACATTGCTCAATTTGCTTCATTGGCCAAAAAATCATAATAATTATTATTTCATCGCTTCTATGGCCTAGAGAGAACTATGAAAACTACTTTATATGTTCAAGGTACCGCAACTGACAGTGTGGAGTCTCTAGTGAATTTTGTTTGTTGTATACTGTTGTAGGTGTACGAACAGATCCTGTCTTGAGAGGTGTAATACCAAACTCATTTGAACACATCTTTACCCATATTGCCAGGACACAAAACCAGCAGTATCTTGTCAGATCATCGTACCTTGAAATATACCAGGAGGATATAAGAGATTTGCTATCTAAAGATCAAAGCAAGAGGCTGGAACTCAAAGAAAGGCCAGACACAGGAGTTTATGTTAAGGATCTGCAATCATTTGTTTGCAAAAGTGTTAAAGAGATTGAACATGTTATGAATGTTGGCAATCAAAACCGTGCAGTTGGGGCAACCAATATGAATGAACATTCCTCAAGATCCCATGCAATCTTCATCATCACCATTGAGTGCAGTGAGCCTGGCAGTGATGGCGAGAGTCATATTCGTGTTGGGAAACTAAACATGGTGGATTTGGCAGGCAGTGAAAGACAATCCAAAACTGGAGCTACGGGAGAACGACTAAAGGAGGCTACAAAAATCAATCTCTCGCTTTCGGCTCTTGGCAATGTCATATCTGCCTTGGTGGATGGAAAAAGTACACATGTTCCTTACAGGGATTCCAAGCTAACAAGACTATTACAAGATTCTTTAGGCGGAAATGCCAGAACAGTTATGGTTGCAAATATTGGCCCTGCAAGCTACAATTTTGAAGAAACCATCACAACATTACGATACGCAAATAGAGCGAAGAACATCAAGAACAAACCAAAGATCAATGAAGATCCGAAAGATGCCTTACTGAGAGAATTCCAGGACGAGATCGCTAAGTTAAAGAGAGAGCTGGAAAGACGTGGTGGCGGAGGAAAGAAAGCTAAGAGGAGAAAGCAACAGGCAAACGGCTCAGTTGAAGAAGATGAAGAAATCGAAGAAGAGGTTGAAGAAAGTGTCCAGAGCGCAGAGGACAAAATTAAGACTGAACAAGCCAAGCTTGAAGATGATAAGAAAGCGCTTCAGGAAAATCACACCATGATGGCAGAGGAGAAAGAGAAGTTCATGGAAGAAATTCAAAAGAGAGCGAGCCAGTTGAAAAAGCAACAAGAAGCGCAAACAGCTCTGAAGGCCAAAATCAAGATGATGGAAAGCAAATTACTGGTTGGAGGGAAAAGCATTGTCGACAAGACCAGCGAACAAGAGAGAGCGCTAGAAGAAAGAAGGCGACAGATTGCAGAGCAGCAGCGCCGCGAGCGGGAGATGCAACAAAAACTCGAGGAAAAAGACGAAAATACATCAGAAATCAAAGAAACTTTTTCATCTCTTCAACAAGAAGTGGACATGAAAACTAAGAAACTTAAAAAGCTGTTTGCGAAACTCCAAACAATCCGCTCAGAGATTACTGATCTTCAAGAGGCGCATATCCGAGAAAGACAAGACTTGGAGCAAGTACAAGAAGATCTGACTAAGGAACTGAAACTAAAGTCGTTGATAATACAGAATTTTATTCCTCCTGATGAAAAGCAGAAACTTACCAACCGAGCAGTGTACGACGAAGAGAATGAGCAGTGGCGACTGAAACCGTCGTCGCAAAATTCAAGCCAGCAAGTCATGGCTAAGAGACCTGTGTCAGCCGTAGGCAACAGGCGACCCATCACTGAGTACGCCAAGATGGCTGCGGCTATGGGAGGTCACATGCGATACAAGGCTGAGAATATTATCATGATCGAACTAGACATGCCCAACAGGACGACCAGGGATTACGAGGGGCCTACTGTGGCCCCTAAAGTACAGGCTGCTTTGGATGCAGCTTTGCAAGATGAAGAGGATGTTACATTAGATGCCGATGTTCTTTTGAGCAAAAATAAAGTCAAAGCAAAACGGCGAGACCGACCAAATGTTAGTGAGCGACCAAAAACAGGGCGTAGAAGTCGAGGCCCACAAGTAACAGACCAGCAGCAGGGATCATCCGAGTCTGTGCAGTATCCAACGGCGAGGGGTCTTGTGGCACCACAAAGAAGAGTTTTACCTCAGTGAAAATTAAGATTGCGTGTGAAATTATGACAGCGTTTCTTTACCTGTTGGAACCAAAGACTGTACGAGTAACCAAACAAGATGAAACTTATAAATTATTGAGTACGTAGACGTACATAATTTGAAGGAGACTTCCTATACATGATGGTGAAAGTGAATCACGATTGATTTAATTGAAGGTACGAAAAAAGGCGAAACAAAATTGAGCGACACAAAATTTCTGAGGATTACATTACAAATAATGACCTTAACAGGCTGTTCCTTTTTCAAAACGTACTTTCCTCGATTCTCCTATCGCTTAGCTGTTTTTAATCCTGATTGGTCCTGTTTTGTCGCACCACTAATCAACCAATCAAGAAGTCCTTGCTGGTATTTTCCCGCCCTTATAGTTCTGGTTGCACAAACTTGTTTGGTTTCTGATTGATTCGTCGCTTAGTCTTGCGACGAGTTGTTATTCTGCAATTAGTTTGACTGTGTATCTATTATTCAAATGTCAATTGACCCACGCTTGACGTTTTTTCGTGTTTTCTTTTGTTCTTTCTTTTCGCGTGGGCTTGAGTTACAGAAATTCAGTTTTAGGGAGCTCAAGCAAACACGATGACGACGGAAGCGAGAACGTCATCTGAAAATGTTACTTCGCGTTTCTGCAATCATTTTTCAATTATTCAAAGTTATCATGTTTGAAAAATGTGTTCTAACTATTCTGGAATTAAATTGGAACCAGCGCTTGGGACATAAGAAGACAAAATTGAACATTTGTCATC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15066	Kinesin-like protein KIF3B OS=Homo sapiens OX=9606 GN=KIF3B PE=1 SV=1
Q61771	Kinesin-like protein KIF3B OS=Mus musculus OX=10090 GN=Kif3b PE=1 SV=1
P46871	Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus OX=7668 GN=KRP95 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000651 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969 all species →	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005875 all species →	Cellular Component	microtubule associated complex	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0051231 all species →	Biological Process	spindle elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20196	KIF3B; kinesin family member 3B	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.