Detailed information of FUN_037440-T1 in Acropora pulchra

Genomic Location: ptg000026l:10459570...10469343
NR annotation: XP_015766044.1, PREDICTED: F-box protein At1g78280-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9M9E8Lysine-specific demethylase JMJ21 OS=Arabidopsis thaliana OX=3702 GN=JMJ21 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008976 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13621
all species →		Cupin_8Cupin-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347
all species →		DomainJmjC domainInterproscan
IPR050910
all species →		FamilyJMJD6 family arginine demethylases/lysyl-hydroxylasesInterproscan
IPR041667
all species →		DomainCupin-like domain 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12480
all species →		ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016706
all species →		Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0018126
all species →		Biological Processprotein hydroxylationInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045905
all species →		Biological Processpositive regulation of translational terminationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_037440-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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