Gene detail

Detailed information of FUN_037658-T2 in Siderastrea siderea

Genomic Location: contig_44:408228...436427
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03849 all species →	Tfb2	Transcription factor Tfb2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004598 all species →	Family	Transcription factor TFIIH subunit p52/Tfb2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13152 all species →	TFIIH, POLYPEPTIDE 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000439 all species →	Cellular Component	transcription factor TFIIH core complex	Interproscan
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0003690 all species →	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005675 all species →	Cellular Component	transcription factor TFIIH holo complex	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0070816 all species →	Biological Process	obsolete phosphorylation of RNA polymerase II C-terminal domain	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_037658-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.