Gene detail

Detailed information of FUN_037853-T1 in Dendrogyra cylindrus

Genomic Location: contig_166:342832...343593
NR annotation: KAJ7364990.1, Ras- protein Rab-38 [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q06AU5	Ras-related protein Rab-32 OS=Sus scrofa OX=9823 GN=RAB32 PE=2 SV=1
Q91YQ1	Ras-related protein Rab-7L1 OS=Mus musculus OX=10090 GN=Rab29 PE=1 SV=1
Q63481	Ras-related protein Rab-7L1 OS=Rattus norvegicus OX=10116 GN=Rab29 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001552 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24073 all species →	DRAB5-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan
GO:0032438 all species →	Biological Process	melanosome organization	Interproscan
GO:0042470 all species →	Cellular Component	melanosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03648	UNG, UDG; uracil-DNA glycosylase	EC:3.2.2.27	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.