Detailed information of FUN_037970-T1 in Acropora pulchra

Genomic Location: ptg000027l:982364...983836
NR annotation: XP_015778497.1, PREDICTED: uncharacterized FAD-linked oxidoreductase YvdP-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P30986Reticuline oxidase OS=Eschscholzia californica OX=3467 GN=BBE1 PE=1 SV=1
Q33DQ2Cannabichromenic acid synthase OS=Cannabis sativa OX=3483 GN=CBCAS PE=1 SV=1
Q8GTB6Tetrahydrocannabinolic acid synthase OS=Cannabis sativa OX=3483 GN=THCAS PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009532 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08031
all species →		BBEBerberine and berberine like DomainInterproscan
PF01565
all species →		FAD_binding_4FAD binding domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012951
all species →		DomainBerberine/berberine-likeInterproscan
IPR050416
all species →		FamilyFAD-linked Oxidoreductases in Biosynthetic PathwaysInterproscan
IPR036318
all species →		Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR006094
all species →		DomainFAD linked oxidase, N-terminalInterproscan
IPR016166
all species →		DomainFAD-binding domain, PCMH-typeInterproscan
IPR006093
all species →		Binding_siteOxygen oxidoreductase covalent FAD-binding siteInterproscan
IPR016169
all species →		Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42973
all species →		BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949
all species →		Molecular FunctionFAD bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_037970-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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