Detailed information of FUN_038019-T1 in Acropora pulchra

Genomic Location: ptg000027l:1527458...1542519
NR annotation: XP_044184449.1, uncharacterized protein CG5098-like isoform X2 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007215 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13771
all species →		zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR052440
all species →		FamilyTranscriptional Regulator and Chromatin RemodelerInterproscan
IPR034732
all species →		DomainExtended PHD (ePHD) domainInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14955
all species →		RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038019-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP