Detailed information of FUN_038115-T1 in Acropora pulchra

Genomic Location: ptg000027l:2535188...2541394
NR annotation: XP_015780760.1, PREDICTED: helicase with zinc finger domain 2-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BYK83'-5' exoribonuclease HELZ2 OS=Homo sapiens OX=9606 GN=HELZ2 PE=1 SV=7
E9QAM53'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1
Q9HEH1Regulator of nonsense transcripts 1 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=2E4.130 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000671 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087
all species →
AAA_12AAA domainDomainInterproscan
PF13086
all species →
AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050534
all species →
FamilyCoronaviruses polyprotein 1abInterproscan
IPR041679
all species →
DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR047187
all species →
DomainUpf1-like, C-terminal helicase domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041677
all species →
DomainDNA2/NAM7 helicase, helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43788
all species →
DNA2/NAM7 HELICASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043139
all species →
Molecular Function5'-3' DNA helicase activityInterproscan
GO:0004386
all species →
Molecular Functionhelicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038115-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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