Detailed information of FUN_038160-T1 in Acropora pulchra

Genomic Location: ptg000027l:3164817...3171441
NR annotation: XP_029191837.2, uncharacterized exonuclease C637.09-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2T9U5RNA exonuclease 5 OS=Bos taurus OX=9913 GN=REXO5 PE=2 SV=1
P53331RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH70 PE=1 SV=1
Q96IC2RNA exonuclease 5 OS=Homo sapiens OX=9606 GN=REXO5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001363 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for FUN_038160-T1 in Acropora pulchra.
 InterPro
InterPro termTypeDescriptionSource
IPR047021
all species →		FamilyRNA exonuclease REXO1/REXO3/REXO4-likeInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR034922
all species →		DomainRNA exonuclease 1-like, exonuclease domainInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013520
all species →		DomainExonuclease, RNase T/DNA polymerase IIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12801
all species →		RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004527
all species →		Molecular Functionexonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038160-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP