Genomic Location: ptg000027l:3541303...3542430
NR annotation: XP_029191828.1, dual specificity protein phosphatase CDC14AB-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_038184-T1 |
| Transcript |
| FUN_038184-T1 |
| Protein |
| FUN_038184-T1 |
| UniProt accession | Description |
|---|---|
| A0A0R4IVA4 | Dual specificity protein phosphatase CDC14AB OS=Danio rerio OX=7955 GN=cdc14ab PE=3 SV=1 |
| Q9UNH5 | Dual specificity protein phosphatase CDC14A OS=Homo sapiens OX=9606 GN=CDC14A PE=1 SV=1 |
| Q6GQT0 | Dual specificity protein phosphatase CDC14A OS=Mus musculus OX=10090 GN=Cdc14a PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002196 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00782 all species → | DSPc | Dual specificity phosphatase, catalytic domain | Domain | Interproscan |
| PF14671 all species → | DSPn | Dual specificity protein phosphatase, N-terminal half | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029021 all species → | Homologous_superfamily | Protein-tyrosine phosphatase-like | Interproscan |
| IPR020422 all species → | Domain | Dual specificity protein phosphatase domain | Interproscan |
| IPR000340 all species → | Domain | Dual specificity phosphatase, catalytic domain | Interproscan |
| IPR050561 all species → | Family | Protein Tyrosine Phosphatase | Interproscan |
| IPR016130 all species → | Active_site | Protein-tyrosine phosphatase, active site | Interproscan |
| IPR003595 all species → | Domain | Protein-tyrosine phosphatase, catalytic | Interproscan |
| IPR000387 all species → | Domain | Tyrosine-specific protein phosphatases domain | Interproscan |
| IPR029260 all species → | Domain | Dual specificity/tyrosine protein phosphatase, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23339 all species → | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006470 all species → | Biological Process | protein dephosphorylation | Interproscan |
| GO:0016311 all species → | Biological Process | dephosphorylation | Interproscan |
| GO:0000226 all species → | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0000922 all species → | Cellular Component | spindle pole | Interproscan |
| GO:0004722 all species → | Molecular Function | protein serine/threonine phosphatase activity | Interproscan |
| GO:0004725 all species → | Molecular Function | protein tyrosine phosphatase activity | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005813 all species → | Cellular Component | centrosome | Interproscan |
| GO:0007096 all species → | Biological Process | regulation of exit from mitosis | Interproscan |
| GO:0032467 all species → | Biological Process | positive regulation of cytokinesis | Interproscan |
| GO:0060271 all species → | Biological Process | cilium assembly | Interproscan |
| GO:0072686 all species → | Cellular Component | mitotic spindle | Interproscan |
| GO:1902636 all species → | Cellular Component | kinociliary basal body | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06639 | CDC14; cell division cycle 14 | EC:3.1.3.16 EC:3.1.3.48 | Cilium and associated proteins | ko03037 | deepkoala |
Genes whose expression across the transcriptome samples of Acropora pulchra tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Acropora pulchra, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
